Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CLN5O75503 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.23■□□□□ 0.35
CLN5O75503 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLN5O75503 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLN5O75503 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLN5O75503 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLN5O75503 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLN5O75503 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CLN5O75503 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLN5O75503 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLN5O75503 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.23■□□□□ 0.35
CLN5O75503 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLN5O75503 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CLN5O75503 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLN5O75503 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.22■□□□□ 0.35
CLN5O75503 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLN5O75503 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.22■□□□□ 0.35
CLN5O75503 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLN5O75503 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.22■□□□□ 0.35
CLN5O75503 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLN5O75503 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLN5O75503 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.22■□□□□ 0.35
CLN5O75503 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLN5O75503 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLN5O75503 AC010997.5-201ENST00000609182 354 ntBASIC17.22■□□□□ 0.35
CLN5O75503 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLN5O75503 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLN5O75503 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLN5O75503 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CLN5O75503 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.22■□□□□ 0.35
CLN5O75503 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CLN5O75503 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLN5O75503 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLN5O75503 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLN5O75503 AC009102.2-201ENST00000606772 1639 ntBASIC17.21■□□□□ 0.35
CLN5O75503 AC087742.1-201ENST00000575880 1738 ntBASIC17.21■□□□□ 0.35
CLN5O75503 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLN5O75503 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLN5O75503 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.21■□□□□ 0.35
CLN5O75503 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.21■□□□□ 0.35
CLN5O75503 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.21■□□□□ 0.35
CLN5O75503 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLN5O75503 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLN5O75503 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLN5O75503 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLN5O75503 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CLN5O75503 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CLN5O75503 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.21■□□□□ 0.35
CLN5O75503 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLN5O75503 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLN5O75503 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLN5O75503 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLN5O75503 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.21■□□□□ 0.35
CLN5O75503 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CLN5O75503 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLN5O75503 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLN5O75503 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLN5O75503 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
CLN5O75503 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.21■□□□□ 0.34
CLN5O75503 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.21■□□□□ 0.34
CLN5O75503 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CLN5O75503 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLN5O75503 AC080038.3-201ENST00000623346 1952 ntBASIC17.2■□□□□ 0.34
CLN5O75503 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLN5O75503 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLN5O75503 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLN5O75503 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLN5O75503 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLN5O75503 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLN5O75503 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.2■□□□□ 0.34
CLN5O75503 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.2■□□□□ 0.34
CLN5O75503 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLN5O75503 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLN5O75503 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLN5O75503 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLN5O75503 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.2■□□□□ 0.34
CLN5O75503 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLN5O75503 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLN5O75503 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLN5O75503 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
CLN5O75503 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLN5O75503 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLN5O75503 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLN5O75503 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLN5O75503 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLN5O75503 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLN5O75503 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.19■□□□□ 0.34
CLN5O75503 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.19■□□□□ 0.34
CLN5O75503 AC009299.2-201ENST00000482477 511 ntBASIC17.19■□□□□ 0.34
CLN5O75503 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CLN5O75503 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLN5O75503 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLN5O75503 AC026471.1-201ENST00000564629 3026 ntBASIC17.18■□□□□ 0.34
CLN5O75503 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLN5O75503 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLN5O75503 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLN5O75503 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLN5O75503 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLN5O75503 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.18■□□□□ 0.34
CLN5O75503 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms