Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.17■□□□□ 0.66
PTP4A3O75365 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.16■□□□□ 0.66
PTP4A3O75365 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.16■□□□□ 0.66
PTP4A3O75365 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTP4A3O75365 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTP4A3O75365 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTP4A3O75365 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PTP4A3O75365 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTP4A3O75365 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTP4A3O75365 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTP4A3O75365 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PTP4A3O75365 BX842568.3-201ENST00000418104 571 ntBASIC19.16■□□□□ 0.66
PTP4A3O75365 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTP4A3O75365 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PTP4A3O75365 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.16■□□□□ 0.66
PTP4A3O75365 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.16■□□□□ 0.66
PTP4A3O75365 SMUG1P1-201ENST00000590640 811 ntBASIC19.16■□□□□ 0.66
PTP4A3O75365 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTP4A3O75365 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTP4A3O75365 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.15■□□□□ 0.66
PTP4A3O75365 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTP4A3O75365 AP006587.3-201ENST00000525742 1516 ntBASIC19.15■□□□□ 0.66
PTP4A3O75365 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTP4A3O75365 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTP4A3O75365 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.15■□□□□ 0.66
PTP4A3O75365 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTP4A3O75365 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.15■□□□□ 0.66
PTP4A3O75365 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTP4A3O75365 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.15■□□□□ 0.66
PTP4A3O75365 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.15■□□□□ 0.66
PTP4A3O75365 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.15■□□□□ 0.66
PTP4A3O75365 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.15■□□□□ 0.66
PTP4A3O75365 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTP4A3O75365 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PTP4A3O75365 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.15■□□□□ 0.66
PTP4A3O75365 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
PTP4A3O75365 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
PTP4A3O75365 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
PTP4A3O75365 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTP4A3O75365 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTP4A3O75365 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.14■□□□□ 0.65
PTP4A3O75365 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PTP4A3O75365 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTP4A3O75365 UNC93B3-201ENST00000308076 687 ntBASIC19.14■□□□□ 0.65
PTP4A3O75365 AL136116.3-201ENST00000402907 1138 ntBASIC19.14■□□□□ 0.65
PTP4A3O75365 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTP4A3O75365 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.14■□□□□ 0.65
PTP4A3O75365 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.14■□□□□ 0.65
PTP4A3O75365 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTP4A3O75365 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.14■□□□□ 0.65
PTP4A3O75365 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.14■□□□□ 0.65
PTP4A3O75365 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTP4A3O75365 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTP4A3O75365 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTP4A3O75365 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTP4A3O75365 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTP4A3O75365 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTP4A3O75365 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.13■□□□□ 0.65
PTP4A3O75365 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.13■□□□□ 0.65
PTP4A3O75365 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTP4A3O75365 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.13■□□□□ 0.65
PTP4A3O75365 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTP4A3O75365 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PTP4A3O75365 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTP4A3O75365 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
PTP4A3O75365 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.13■□□□□ 0.65
PTP4A3O75365 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.13■□□□□ 0.65
PTP4A3O75365 AL049796.1-201ENST00000565336 1766 ntBASIC19.13■□□□□ 0.65
PTP4A3O75365 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTP4A3O75365 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTP4A3O75365 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTP4A3O75365 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTP4A3O75365 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.13■□□□□ 0.65
PTP4A3O75365 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTP4A3O75365 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PTP4A3O75365 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTP4A3O75365 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTP4A3O75365 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTP4A3O75365 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTP4A3O75365 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTP4A3O75365 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTP4A3O75365 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTP4A3O75365 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PTP4A3O75365 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTP4A3O75365 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTP4A3O75365 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.12■□□□□ 0.65
PTP4A3O75365 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PTP4A3O75365 MIR4767-201ENST00000582827 78 ntBASIC19.12■□□□□ 0.65
PTP4A3O75365 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTP4A3O75365 AC233992.3-201ENST00000607491 485 ntBASIC19.12■□□□□ 0.65
PTP4A3O75365 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTP4A3O75365 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTP4A3O75365 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.12■□□□□ 0.65
PTP4A3O75365 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
PTP4A3O75365 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.12■□□□□ 0.65
PTP4A3O75365 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.12■□□□□ 0.65
PTP4A3O75365 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PTP4A3O75365 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTP4A3O75365 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTP4A3O75365 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms