Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
KDELR3O43731 AC104187.1-201ENST00000607510 612 ntBASIC21.66■■□□□ 1.06
KDELR3O43731 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
KDELR3O43731 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
KDELR3O43731 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KDELR3O43731 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KDELR3O43731 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KDELR3O43731 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KDELR3O43731 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.66■■□□□ 1.06
KDELR3O43731 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KDELR3O43731 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KDELR3O43731 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
KDELR3O43731 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KDELR3O43731 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
KDELR3O43731 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KDELR3O43731 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.65■■□□□ 1.06
KDELR3O43731 KRT19P1-201ENST00000405746 1186 ntBASIC21.65■■□□□ 1.06
KDELR3O43731 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.65■■□□□ 1.06
KDELR3O43731 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.65■■□□□ 1.06
KDELR3O43731 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.65■■□□□ 1.06
KDELR3O43731 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.65■■□□□ 1.06
KDELR3O43731 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.65■■□□□ 1.06
KDELR3O43731 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
KDELR3O43731 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KDELR3O43731 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.65■■□□□ 1.06
KDELR3O43731 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KDELR3O43731 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KDELR3O43731 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
KDELR3O43731 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KDELR3O43731 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.64■■□□□ 1.05
KDELR3O43731 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
KDELR3O43731 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KDELR3O43731 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KDELR3O43731 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.64■■□□□ 1.05
KDELR3O43731 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KDELR3O43731 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.64■■□□□ 1.05
KDELR3O43731 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
KDELR3O43731 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
KDELR3O43731 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
KDELR3O43731 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.63■■□□□ 1.05
KDELR3O43731 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDELR3O43731 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDELR3O43731 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDELR3O43731 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDELR3O43731 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
KDELR3O43731 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
KDELR3O43731 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.63■■□□□ 1.05
KDELR3O43731 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.63■■□□□ 1.05
KDELR3O43731 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.63■■□□□ 1.05
KDELR3O43731 AC104564.3-201ENST00000582367 638 ntBASIC21.63■■□□□ 1.05
KDELR3O43731 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
KDELR3O43731 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.63■■□□□ 1.05
KDELR3O43731 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDELR3O43731 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDELR3O43731 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDELR3O43731 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDELR3O43731 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDELR3O43731 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDELR3O43731 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.63■■□□□ 1.05
KDELR3O43731 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.63■■□□□ 1.05
KDELR3O43731 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KDELR3O43731 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KDELR3O43731 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KDELR3O43731 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
KDELR3O43731 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KDELR3O43731 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.62■■□□□ 1.05
KDELR3O43731 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
KDELR3O43731 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KDELR3O43731 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KDELR3O43731 AC138907.5-202ENST00000569484 235 ntBASIC21.62■■□□□ 1.05
KDELR3O43731 AC022517.1-201ENST00000592429 346 ntBASIC21.62■■□□□ 1.05
KDELR3O43731 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.62■■□□□ 1.05
KDELR3O43731 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.62■■□□□ 1.05
KDELR3O43731 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KDELR3O43731 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.61■■□□□ 1.05
KDELR3O43731 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.61■■□□□ 1.05
KDELR3O43731 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.61■■□□□ 1.05
KDELR3O43731 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
KDELR3O43731 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KDELR3O43731 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KDELR3O43731 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KDELR3O43731 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
KDELR3O43731 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KDELR3O43731 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.61■■□□□ 1.05
KDELR3O43731 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KDELR3O43731 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.61■■□□□ 1.05
KDELR3O43731 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
KDELR3O43731 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.61■■□□□ 1.05
KDELR3O43731 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.61■■□□□ 1.05
KDELR3O43731 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KDELR3O43731 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
KDELR3O43731 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KDELR3O43731 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.6■■□□□ 1.05
KDELR3O43731 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.6■■□□□ 1.05
KDELR3O43731 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KDELR3O43731 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
KDELR3O43731 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KDELR3O43731 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
KDELR3O43731 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KDELR3O43731 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms