Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PAX4O43316 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PAX4O43316 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PAX4O43316 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PAX4O43316 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC15.14■□□□□ 0.01
PAX4O43316 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
PAX4O43316 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PAX4O43316 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.14■□□□□ 0.01
PAX4O43316 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PAX4O43316 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.14■□□□□ 0.01
PAX4O43316 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
PAX4O43316 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PAX4O43316 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PAX4O43316 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.14■□□□□ 0.01
PAX4O43316 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PAX4O43316 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PAX4O43316 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PAX4O43316 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC15.13■□□□□ 0.01
PAX4O43316 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PAX4O43316 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC15.13■□□□□ 0.01
PAX4O43316 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PAX4O43316 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PAX4O43316 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PAX4O43316 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC15.13■□□□□ 0.01
PAX4O43316 EP400NL-214ENST00000641289 2402 ntBASIC15.13■□□□□ 0.01
PAX4O43316 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PAX4O43316 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PAX4O43316 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PAX4O43316 MIR572-201ENST00000384983 95 ntBASIC15.13■□□□□ 0.01
PAX4O43316 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PAX4O43316 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.13■□□□□ 0.01
PAX4O43316 AC105265.2-201ENST00000467189 838 ntBASIC15.13■□□□□ 0.01
PAX4O43316 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PAX4O43316 LINC00565-201ENST00000562710 2331 ntBASIC15.13■□□□□ 0.01
PAX4O43316 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.13■□□□□ 0.01
PAX4O43316 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.13■□□□□ 0.01
PAX4O43316 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.13■□□□□ 0.01
PAX4O43316 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PAX4O43316 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PAX4O43316 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PAX4O43316 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PAX4O43316 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.13■□□□□ 0.01
PAX4O43316 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PAX4O43316 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PAX4O43316 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.12■□□□□ 0.01
PAX4O43316 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PAX4O43316 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PAX4O43316 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PAX4O43316 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PAX4O43316 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PAX4O43316 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.12■□□□□ 0.01
PAX4O43316 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PAX4O43316 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.12■□□□□ 0.01
PAX4O43316 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PAX4O43316 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PAX4O43316 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PAX4O43316 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.12■□□□□ 0.01
PAX4O43316 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.12■□□□□ 0.01
PAX4O43316 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC15.12■□□□□ 0.01
PAX4O43316 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.12■□□□□ 0.01
PAX4O43316 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.12■□□□□ 0.01
PAX4O43316 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PAX4O43316 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PAX4O43316 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.12■□□□□ 0.01
PAX4O43316 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PAX4O43316 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PAX4O43316 AP004607.7-201ENST00000527152 1677 ntBASIC15.12■□□□□ 0.01
PAX4O43316 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PAX4O43316 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PAX4O43316 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PAX4O43316 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC15.12■□□□□ 0.01
PAX4O43316 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PAX4O43316 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PAX4O43316 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PAX4O43316 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PAX4O43316 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PAX4O43316 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PAX4O43316 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PAX4O43316 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.11■□□□□ 0.01
PAX4O43316 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PAX4O43316 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PAX4O43316 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PAX4O43316 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PAX4O43316 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.11■□□□□ 0.01
PAX4O43316 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PAX4O43316 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.11■□□□□ 0.01
PAX4O43316 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.11■□□□□ 0.01
PAX4O43316 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PAX4O43316 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15.11■□□□□ 0.01
PAX4O43316 SMUG1P1-201ENST00000590640 811 ntBASIC15.11■□□□□ 0.01
PAX4O43316 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PAX4O43316 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PAX4O43316 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PAX4O43316 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.11■□□□□ 0.01
PAX4O43316 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PAX4O43316 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PAX4O43316 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PAX4O43316 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PAX4O43316 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PAX4O43316 C11orf96-202ENST00000528572 1834 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms