Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.08■□□□□ 0.48
SHOXO15266 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SHOXO15266 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.08■□□□□ 0.48
SHOXO15266 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHOXO15266 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHOXO15266 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.08■□□□□ 0.48
SHOXO15266 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHOXO15266 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.08■□□□□ 0.48
SHOXO15266 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SHOXO15266 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHOXO15266 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHOXO15266 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHOXO15266 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHOXO15266 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHOXO15266 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHOXO15266 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SHOXO15266 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.07■□□□□ 0.48
SHOXO15266 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHOXO15266 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHOXO15266 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SHOXO15266 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
SHOXO15266 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.07■□□□□ 0.48
SHOXO15266 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SHOXO15266 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.07■□□□□ 0.48
SHOXO15266 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHOXO15266 RARRES2P1-201ENST00000474487 481 ntBASIC18.07■□□□□ 0.48
SHOXO15266 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.07■□□□□ 0.48
SHOXO15266 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHOXO15266 LINC01006-201ENST00000333319 2292 ntBASIC18.07■□□□□ 0.48
SHOXO15266 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHOXO15266 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.07■□□□□ 0.48
SHOXO15266 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHOXO15266 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.07■□□□□ 0.48
SHOXO15266 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHOXO15266 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SHOXO15266 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHOXO15266 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHOXO15266 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.06■□□□□ 0.48
SHOXO15266 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHOXO15266 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHOXO15266 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SHOXO15266 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHOXO15266 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHOXO15266 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.06■□□□□ 0.48
SHOXO15266 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.06■□□□□ 0.48
SHOXO15266 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SHOXO15266 AC138932.1-201ENST00000534164 6830 ntBASIC18.06■□□□□ 0.48
SHOXO15266 AL353803.4-201ENST00000565882 1934 ntBASIC18.06■□□□□ 0.48
SHOXO15266 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHOXO15266 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHOXO15266 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SHOXO15266 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHOXO15266 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SHOXO15266 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SHOXO15266 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SHOXO15266 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHOXO15266 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.05■□□□□ 0.48
SHOXO15266 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.05■□□□□ 0.48
SHOXO15266 Z92544.1-202ENST00000571933 1220 ntBASIC18.05■□□□□ 0.48
SHOXO15266 AC092028.1-203ENST00000608262 953 ntBASIC18.05■□□□□ 0.48
SHOXO15266 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.05■□□□□ 0.48
SHOXO15266 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.05■□□□□ 0.48
SHOXO15266 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SHOXO15266 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHOXO15266 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHOXO15266 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHOXO15266 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHOXO15266 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SHOXO15266 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SHOXO15266 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SHOXO15266 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHOXO15266 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHOXO15266 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHOXO15266 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHOXO15266 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHOXO15266 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SHOXO15266 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHOXO15266 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.04■□□□□ 0.48
SHOXO15266 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.04■□□□□ 0.48
SHOXO15266 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.04■□□□□ 0.48
SHOXO15266 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SHOXO15266 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHOXO15266 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHOXO15266 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHOXO15266 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
SHOXO15266 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHOXO15266 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHOXO15266 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SHOXO15266 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SHOXO15266 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.03■□□□□ 0.48
SHOXO15266 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SHOXO15266 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.03■□□□□ 0.48
SHOXO15266 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHOXO15266 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHOXO15266 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHOXO15266 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHOXO15266 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.03■□□□□ 0.48
SHOXO15266 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHOXO15266 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHOXO15266 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms