Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.44■■□□□ 1.5
ATP2A1O14983 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.44■■□□□ 1.5
ATP2A1O14983 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.44■■□□□ 1.5
ATP2A1O14983 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ATP2A1O14983 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC24.44■■□□□ 1.5
ATP2A1O14983 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ATP2A1O14983 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ATP2A1O14983 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ATP2A1O14983 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP2A1O14983 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP2A1O14983 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.43■■□□□ 1.5
ATP2A1O14983 AF201337.1-201ENST00000520239 748 ntBASIC24.43■■□□□ 1.5
ATP2A1O14983 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP2A1O14983 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC24.43■■□□□ 1.5
ATP2A1O14983 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATP2A1O14983 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATP2A1O14983 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATP2A1O14983 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATP2A1O14983 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATP2A1O14983 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
ATP2A1O14983 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
ATP2A1O14983 AC073210.2-201ENST00000430369 194 ntBASIC24.42■■□□□ 1.5
ATP2A1O14983 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
ATP2A1O14983 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
ATP2A1O14983 AC068338.2-201ENST00000563278 1430 ntBASIC24.42■■□□□ 1.5
ATP2A1O14983 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATP2A1O14983 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC24.41■■□□□ 1.5
ATP2A1O14983 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
ATP2A1O14983 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
ATP2A1O14983 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
ATP2A1O14983 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ATP2A1O14983 SLC29A4P1-201ENST00000398760 971 ntBASIC24.41■■□□□ 1.5
ATP2A1O14983 POU5F1P4-201ENST00000413175 1085 ntBASIC24.41■■□□□ 1.5
ATP2A1O14983 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
ATP2A1O14983 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.41■■□□□ 1.5
ATP2A1O14983 AC008175.2-201ENST00000612840 297 ntBASIC24.41■■□□□ 1.5
ATP2A1O14983 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ATP2A1O14983 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ATP2A1O14983 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24.4■■□□□ 1.5
ATP2A1O14983 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ATP2A1O14983 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP2A1O14983 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP2A1O14983 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.4■■□□□ 1.5
ATP2A1O14983 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ATP2A1O14983 AL138781.1-201ENST00000566567 1274 ntBASIC24.4■■□□□ 1.5
ATP2A1O14983 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC24.4■■□□□ 1.5
ATP2A1O14983 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.4■■□□□ 1.5
ATP2A1O14983 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP2A1O14983 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
ATP2A1O14983 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ATP2A1O14983 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ATP2A1O14983 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
ATP2A1O14983 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
ATP2A1O14983 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.5
ATP2A1O14983 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ATP2A1O14983 ABHD17AP1-201ENST00000358206 933 ntBASIC24.39■■□□□ 1.49
ATP2A1O14983 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
ATP2A1O14983 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.39■■□□□ 1.49
ATP2A1O14983 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC24.39■■□□□ 1.49
ATP2A1O14983 PFKL-212ENST00000628044 129 ntTSL 3 BASIC24.39■■□□□ 1.49
ATP2A1O14983 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.39■■□□□ 1.49
ATP2A1O14983 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
ATP2A1O14983 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ATP2A1O14983 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.38■■□□□ 1.49
ATP2A1O14983 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ATP2A1O14983 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.38■■□□□ 1.49
ATP2A1O14983 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ATP2A1O14983 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
ATP2A1O14983 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.38■■□□□ 1.49
ATP2A1O14983 AC105036.2-201ENST00000569468 176 ntBASIC24.38■■□□□ 1.49
ATP2A1O14983 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ATP2A1O14983 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC24.38■■□□□ 1.49
ATP2A1O14983 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.38■■□□□ 1.49
ATP2A1O14983 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC24.38■■□□□ 1.49
ATP2A1O14983 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ATP2A1O14983 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
ATP2A1O14983 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ATP2A1O14983 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.37■■□□□ 1.49
ATP2A1O14983 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.37■■□□□ 1.49
ATP2A1O14983 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.37■■□□□ 1.49
ATP2A1O14983 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.37■■□□□ 1.49
ATP2A1O14983 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.37■■□□□ 1.49
ATP2A1O14983 AC120498.10-201ENST00000621827 505 ntBASIC24.37■■□□□ 1.49
ATP2A1O14983 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
ATP2A1O14983 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ATP2A1O14983 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
ATP2A1O14983 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
ATP2A1O14983 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ATP2A1O14983 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ATP2A1O14983 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC24.36■■□□□ 1.49
ATP2A1O14983 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
ATP2A1O14983 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.36■■□□□ 1.49
ATP2A1O14983 CYP2T1P-201ENST00000432607 1285 ntBASIC24.36■■□□□ 1.49
ATP2A1O14983 AC069152.1-201ENST00000438030 544 ntBASIC24.36■■□□□ 1.49
ATP2A1O14983 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.36■■□□□ 1.49
ATP2A1O14983 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
ATP2A1O14983 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
ATP2A1O14983 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ATP2A1O14983 KRT16P2-201ENST00000414673 1423 ntBASIC24.35■■□□□ 1.49
ATP2A1O14983 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms