Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.04■□□□□ 0.8
CLDN4O14493 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN4O14493 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN4O14493 DUX4L2-201ENST00000561772 1275 ntBASIC20.04■□□□□ 0.8
CLDN4O14493 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.04■□□□□ 0.8
CLDN4O14493 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
CLDN4O14493 DUX4L6-201ENST00000626483 1275 ntBASIC20.04■□□□□ 0.8
CLDN4O14493 DUX4L1-201ENST00000627662 1275 ntBASIC20.04■□□□□ 0.8
CLDN4O14493 DUX4L8-201ENST00000629013 1275 ntBASIC20.04■□□□□ 0.8
CLDN4O14493 DUX4L3-201ENST00000630187 1275 ntBASIC20.04■□□□□ 0.8
CLDN4O14493 DUX4L7-201ENST00000630678 1275 ntBASIC20.04■□□□□ 0.8
CLDN4O14493 DUX4L5-201ENST00000630834 1275 ntBASIC20.04■□□□□ 0.8
CLDN4O14493 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN4O14493 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN4O14493 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN4O14493 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.03■□□□□ 0.8
CLDN4O14493 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN4O14493 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CLDN4O14493 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDN4O14493 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.03■□□□□ 0.8
CLDN4O14493 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN4O14493 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN4O14493 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CLDN4O14493 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN4O14493 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN4O14493 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN4O14493 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN4O14493 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN4O14493 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CLDN4O14493 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CLDN4O14493 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN4O14493 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN4O14493 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CLDN4O14493 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN4O14493 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN4O14493 KRT87P-202ENST00000534226 1464 ntBASIC20.02■□□□□ 0.8
CLDN4O14493 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN4O14493 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN4O14493 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN4O14493 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLDN4O14493 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLDN4O14493 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.02■□□□□ 0.79
CLDN4O14493 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN4O14493 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
CLDN4O14493 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN4O14493 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN4O14493 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CLDN4O14493 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN4O14493 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN4O14493 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN4O14493 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.01■□□□□ 0.79
CLDN4O14493 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.01■□□□□ 0.79
CLDN4O14493 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.01■□□□□ 0.79
CLDN4O14493 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN4O14493 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.01■□□□□ 0.79
CLDN4O14493 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.01■□□□□ 0.79
CLDN4O14493 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.01■□□□□ 0.79
CLDN4O14493 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN4O14493 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN4O14493 EP400NL-214ENST00000641289 2402 ntBASIC20.01■□□□□ 0.79
CLDN4O14493 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN4O14493 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN4O14493 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CLDN4O14493 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN4O14493 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDN4O14493 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDN4O14493 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN4O14493 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDN4O14493 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN4O14493 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20■□□□□ 0.79
CLDN4O14493 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20■□□□□ 0.79
CLDN4O14493 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDN4O14493 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN4O14493 AC104564.3-201ENST00000582367 638 ntBASIC20■□□□□ 0.79
CLDN4O14493 NTF6G-201ENST00000591094 616 ntBASIC20■□□□□ 0.79
CLDN4O14493 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20■□□□□ 0.79
CLDN4O14493 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDN4O14493 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN4O14493 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CLDN4O14493 AC003102.1-202ENST00000563394 1796 ntBASIC20■□□□□ 0.79
CLDN4O14493 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20■□□□□ 0.79
CLDN4O14493 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN4O14493 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN4O14493 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CLDN4O14493 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20■□□□□ 0.79
CLDN4O14493 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CLDN4O14493 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN4O14493 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN4O14493 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN4O14493 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN4O14493 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.99■□□□□ 0.79
CLDN4O14493 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN4O14493 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.99■□□□□ 0.79
CLDN4O14493 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN4O14493 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.99■□□□□ 0.79
CLDN4O14493 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.99■□□□□ 0.79
CLDN4O14493 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN4O14493 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN4O14493 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN4O14493 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms