Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TMEM235A6NFC5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM235A6NFC5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM235A6NFC5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.12■□□□□ 0.49
TMEM235A6NFC5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM235A6NFC5 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM235A6NFC5 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM235A6NFC5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEM235A6NFC5 OXCT2P1-201ENST00000447263 1535 ntBASIC18.12■□□□□ 0.49
TMEM235A6NFC5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM235A6NFC5 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM235A6NFC5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TMEM235A6NFC5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM235A6NFC5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TMEM235A6NFC5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TMEM235A6NFC5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TMEM235A6NFC5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.11■□□□□ 0.49
TMEM235A6NFC5 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.11■□□□□ 0.49
TMEM235A6NFC5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM235A6NFC5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.11■□□□□ 0.49
TMEM235A6NFC5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM235A6NFC5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM235A6NFC5 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TMEM235A6NFC5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM235A6NFC5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TMEM235A6NFC5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM235A6NFC5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM235A6NFC5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TMEM235A6NFC5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM235A6NFC5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TMEM235A6NFC5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM235A6NFC5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
TMEM235A6NFC5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM235A6NFC5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM235A6NFC5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM235A6NFC5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM235A6NFC5 FEM1AP1-201ENST00000431297 1995 ntBASIC18.1■□□□□ 0.49
TMEM235A6NFC5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM235A6NFC5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.1■□□□□ 0.49
TMEM235A6NFC5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM235A6NFC5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM235A6NFC5 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM235A6NFC5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.1■□□□□ 0.49
TMEM235A6NFC5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.1■□□□□ 0.49
TMEM235A6NFC5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TMEM235A6NFC5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.1■□□□□ 0.49
TMEM235A6NFC5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM235A6NFC5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM235A6NFC5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM235A6NFC5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM235A6NFC5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM235A6NFC5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM235A6NFC5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM235A6NFC5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM235A6NFC5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.09■□□□□ 0.49
TMEM235A6NFC5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM235A6NFC5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM235A6NFC5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM235A6NFC5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM235A6NFC5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.09■□□□□ 0.49
TMEM235A6NFC5 KRT125P-201ENST00000546827 989 ntBASIC18.09■□□□□ 0.49
TMEM235A6NFC5 AL451085.2-201ENST00000605085 799 ntBASIC18.09■□□□□ 0.49
TMEM235A6NFC5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.09■□□□□ 0.49
TMEM235A6NFC5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.49
TMEM235A6NFC5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.08■□□□□ 0.49
TMEM235A6NFC5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.08■□□□□ 0.49
TMEM235A6NFC5 AC133637.1-201ENST00000624115 1537 ntBASIC18.08■□□□□ 0.49
TMEM235A6NFC5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TMEM235A6NFC5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
TMEM235A6NFC5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TMEM235A6NFC5 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TMEM235A6NFC5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.08■□□□□ 0.49
TMEM235A6NFC5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
TMEM235A6NFC5 RNF165-205ENST00000588679 2904 ntBASIC18.08■□□□□ 0.49
TMEM235A6NFC5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM235A6NFC5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM235A6NFC5 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM235A6NFC5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.08■□□□□ 0.48
TMEM235A6NFC5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM235A6NFC5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM235A6NFC5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM235A6NFC5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM235A6NFC5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TMEM235A6NFC5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM235A6NFC5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM235A6NFC5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM235A6NFC5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM235A6NFC5 AL049796.1-201ENST00000565336 1766 ntBASIC18.07■□□□□ 0.48
TMEM235A6NFC5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM235A6NFC5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.07■□□□□ 0.48
TMEM235A6NFC5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM235A6NFC5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.07■□□□□ 0.48
TMEM235A6NFC5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM235A6NFC5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.07■□□□□ 0.48
TMEM235A6NFC5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TMEM235A6NFC5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.07■□□□□ 0.48
TMEM235A6NFC5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM235A6NFC5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TMEM235A6NFC5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM235A6NFC5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms