Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
LOC102724428A0A0B4J2F2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC27.38■■□□□ 1.97
LOC102724428A0A0B4J2F2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC27.37■■□□□ 1.97
LOC102724428A0A0B4J2F2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC27.37■■□□□ 1.97
LOC102724428A0A0B4J2F2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
LOC102724428A0A0B4J2F2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC27.37■■□□□ 1.97
LOC102724428A0A0B4J2F2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
LOC102724428A0A0B4J2F2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC27.37■■□□□ 1.97
LOC102724428A0A0B4J2F2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC27.37■■□□□ 1.97
LOC102724428A0A0B4J2F2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC27.37■■□□□ 1.97
LOC102724428A0A0B4J2F2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC27.37■■□□□ 1.97
LOC102724428A0A0B4J2F2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC27.37■■□□□ 1.97
LOC102724428A0A0B4J2F2 AL162412.1-201ENST00000567129 965 ntBASIC27.37■■□□□ 1.97
LOC102724428A0A0B4J2F2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC27.37■■□□□ 1.97
LOC102724428A0A0B4J2F2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC27.37■■□□□ 1.97
LOC102724428A0A0B4J2F2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC27.37■■□□□ 1.97
LOC102724428A0A0B4J2F2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
LOC102724428A0A0B4J2F2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
LOC102724428A0A0B4J2F2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC27.37■■□□□ 1.97
LOC102724428A0A0B4J2F2 RBM17P2-201ENST00000616397 1405 ntBASIC27.36■■□□□ 1.97
LOC102724428A0A0B4J2F2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC27.36■■□□□ 1.97
LOC102724428A0A0B4J2F2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
LOC102724428A0A0B4J2F2 AC006058.3-201ENST00000606217 1069 ntBASIC27.36■■□□□ 1.97
LOC102724428A0A0B4J2F2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC27.36■■□□□ 1.97
LOC102724428A0A0B4J2F2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
LOC102724428A0A0B4J2F2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC27.36■■□□□ 1.97
LOC102724428A0A0B4J2F2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
LOC102724428A0A0B4J2F2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC27.35■■□□□ 1.97
LOC102724428A0A0B4J2F2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC27.35■■□□□ 1.97
LOC102724428A0A0B4J2F2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
LOC102724428A0A0B4J2F2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
LOC102724428A0A0B4J2F2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC27.35■■□□□ 1.97
LOC102724428A0A0B4J2F2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
LOC102724428A0A0B4J2F2 POU5F1P4-201ENST00000413175 1085 ntBASIC27.35■■□□□ 1.97
LOC102724428A0A0B4J2F2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC27.35■■□□□ 1.97
LOC102724428A0A0B4J2F2 AC128676.1-201ENST00000454392 318 ntBASIC27.35■■□□□ 1.97
LOC102724428A0A0B4J2F2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC27.35■■□□□ 1.97
LOC102724428A0A0B4J2F2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
LOC102724428A0A0B4J2F2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC27.35■■□□□ 1.97
LOC102724428A0A0B4J2F2 AL591742.1-201ENST00000604433 565 ntBASIC27.35■■□□□ 1.97
LOC102724428A0A0B4J2F2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC27.35■■□□□ 1.97
LOC102724428A0A0B4J2F2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
LOC102724428A0A0B4J2F2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC27.34■■□□□ 1.97
LOC102724428A0A0B4J2F2 AL158047.1-201ENST00000445918 881 ntBASIC27.34■■□□□ 1.97
LOC102724428A0A0B4J2F2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
LOC102724428A0A0B4J2F2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC27.33■■□□□ 1.97
LOC102724428A0A0B4J2F2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
LOC102724428A0A0B4J2F2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LOC102724428A0A0B4J2F2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
LOC102724428A0A0B4J2F2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
LOC102724428A0A0B4J2F2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LOC102724428A0A0B4J2F2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
LOC102724428A0A0B4J2F2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
LOC102724428A0A0B4J2F2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC27.33■■□□□ 1.97
LOC102724428A0A0B4J2F2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
LOC102724428A0A0B4J2F2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC27.33■■□□□ 1.97
LOC102724428A0A0B4J2F2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LOC102724428A0A0B4J2F2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC27.33■■□□□ 1.97
LOC102724428A0A0B4J2F2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
LOC102724428A0A0B4J2F2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.33■■□□□ 1.96
LOC102724428A0A0B4J2F2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
LOC102724428A0A0B4J2F2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
LOC102724428A0A0B4J2F2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
LOC102724428A0A0B4J2F2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
LOC102724428A0A0B4J2F2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
LOC102724428A0A0B4J2F2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
LOC102724428A0A0B4J2F2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
LOC102724428A0A0B4J2F2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC27.32■■□□□ 1.96
LOC102724428A0A0B4J2F2 AL596275.1-201ENST00000423464 877 ntBASIC27.32■■□□□ 1.96
LOC102724428A0A0B4J2F2 AC142381.4-202ENST00000563973 229 ntBASIC27.32■■□□□ 1.96
LOC102724428A0A0B4J2F2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC27.32■■□□□ 1.96
LOC102724428A0A0B4J2F2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC27.32■■□□□ 1.96
LOC102724428A0A0B4J2F2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
LOC102724428A0A0B4J2F2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
LOC102724428A0A0B4J2F2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
LOC102724428A0A0B4J2F2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
LOC102724428A0A0B4J2F2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC27.32■■□□□ 1.96
LOC102724428A0A0B4J2F2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
LOC102724428A0A0B4J2F2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
LOC102724428A0A0B4J2F2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC27.31■■□□□ 1.96
LOC102724428A0A0B4J2F2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC27.31■■□□□ 1.96
LOC102724428A0A0B4J2F2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
LOC102724428A0A0B4J2F2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
LOC102724428A0A0B4J2F2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC27.31■■□□□ 1.96
LOC102724428A0A0B4J2F2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC27.31■■□□□ 1.96
LOC102724428A0A0B4J2F2 KRT16P2-201ENST00000414673 1423 ntBASIC27.31■■□□□ 1.96
LOC102724428A0A0B4J2F2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC27.31■■□□□ 1.96
LOC102724428A0A0B4J2F2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC27.31■■□□□ 1.96
LOC102724428A0A0B4J2F2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC27.31■■□□□ 1.96
LOC102724428A0A0B4J2F2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
LOC102724428A0A0B4J2F2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LOC102724428A0A0B4J2F2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LOC102724428A0A0B4J2F2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC27.3■■□□□ 1.96
LOC102724428A0A0B4J2F2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC27.3■■□□□ 1.96
LOC102724428A0A0B4J2F2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC27.3■■□□□ 1.96
LOC102724428A0A0B4J2F2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LOC102724428A0A0B4J2F2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
LOC102724428A0A0B4J2F2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC27.3■■□□□ 1.96
LOC102724428A0A0B4J2F2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
LOC102724428A0A0B4J2F2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms