Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-1A0A0B4J245 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-1A0A0B4J245 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-1A0A0B4J245 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV12-1A0A0B4J245 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-1A0A0B4J245 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-1A0A0B4J245 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 HES4-202ENST00000428771 1040 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 AL020996.1-203ENST00000536896 2307 ntBASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV12-1A0A0B4J245 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 AFG3L1P-217ENST00000557444 2447 ntBASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 AC073314.1-201ENST00000568729 2216 ntBASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 DUX4L4-201ENST00000566884 1269 ntBASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV12-1A0A0B4J245 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 AC022616.5-201ENST00000518796 181 ntBASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 LSM7-203ENST00000585409 512 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms