Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 AC068587.7-201ENST00000641602 218 ntBASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV1-2A0A0B4J238 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRAV1-2A0A0B4J238 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV1-2A0A0B4J238 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV1-2A0A0B4J238 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV1-2A0A0B4J238 AL031848.2-201ENST00000607670 837 ntBASIC18.49■□□□□ 0.55
TRAV1-2A0A0B4J238 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV1-2A0A0B4J238 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV1-2A0A0B4J238 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV1-2A0A0B4J238 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV1-2A0A0B4J238 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV1-2A0A0B4J238 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TRAV1-2A0A0B4J238 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV1-2A0A0B4J238 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV1-2A0A0B4J238 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TRAV1-2A0A0B4J238 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV1-2A0A0B4J238 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV1-2A0A0B4J238 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV1-2A0A0B4J238 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV1-2A0A0B4J238 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV1-2A0A0B4J238 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV1-2A0A0B4J238 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV1-2A0A0B4J238 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV1-2A0A0B4J238 BX664725.1-201ENST00000438252 379 ntBASIC18.48■□□□□ 0.55
TRAV1-2A0A0B4J238 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV1-2A0A0B4J238 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV1-2A0A0B4J238 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV1-2A0A0B4J238 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV1-2A0A0B4J238 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV1-2A0A0B4J238 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TRAV1-2A0A0B4J238 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV1-2A0A0B4J238 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV1-2A0A0B4J238 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV1-2A0A0B4J238 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV1-2A0A0B4J238 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV1-2A0A0B4J238 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV1-2A0A0B4J238 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV1-2A0A0B4J238 AC092028.1-203ENST00000608262 953 ntBASIC18.47■□□□□ 0.55
TRAV1-2A0A0B4J238 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TRAV1-2A0A0B4J238 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAV1-2A0A0B4J238 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV1-2A0A0B4J238 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.47■□□□□ 0.55
TRAV1-2A0A0B4J238 AC006128.1-201ENST00000624704 1661 ntBASIC18.47■□□□□ 0.55
TRAV1-2A0A0B4J238 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV1-2A0A0B4J238 AC007952.6-201ENST00000573168 2673 ntBASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 AC003957.1-201ENST00000625108 2673 ntBASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 AC133637.1-201ENST00000624115 1537 ntBASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV1-2A0A0B4J238 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.46■□□□□ 0.54
TRAV1-2A0A0B4J238 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV1-2A0A0B4J238 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV1-2A0A0B4J238 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV1-2A0A0B4J238 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms