Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV30A0A087WSZ9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV30A0A087WSZ9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV30A0A087WSZ9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV30A0A087WSZ9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV30A0A087WSZ9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV30A0A087WSZ9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRAV30A0A087WSZ9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV30A0A087WSZ9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRAV30A0A087WSZ9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV30A0A087WSZ9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV30A0A087WSZ9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV30A0A087WSZ9 AC026310.3-201ENST00000625186 2373 ntBASIC16.66■□□□□ 0.26
TRAV30A0A087WSZ9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV30A0A087WSZ9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRAV30A0A087WSZ9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV30A0A087WSZ9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRAV30A0A087WSZ9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV30A0A087WSZ9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV30A0A087WSZ9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.66■□□□□ 0.26
TRAV30A0A087WSZ9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV30A0A087WSZ9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV30A0A087WSZ9 AC010525.1-201ENST00000585559 441 ntBASIC16.66■□□□□ 0.26
TRAV30A0A087WSZ9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV30A0A087WSZ9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRAV30A0A087WSZ9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV30A0A087WSZ9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV30A0A087WSZ9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV30A0A087WSZ9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV30A0A087WSZ9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV30A0A087WSZ9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV30A0A087WSZ9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRAV30A0A087WSZ9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRAV30A0A087WSZ9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV30A0A087WSZ9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV30A0A087WSZ9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV30A0A087WSZ9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV30A0A087WSZ9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV30A0A087WSZ9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV30A0A087WSZ9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV30A0A087WSZ9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV30A0A087WSZ9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV30A0A087WSZ9 MIR4466-201ENST00000606121 54 ntBASIC16.65■□□□□ 0.26
TRAV30A0A087WSZ9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRAV30A0A087WSZ9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV30A0A087WSZ9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV30A0A087WSZ9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV30A0A087WSZ9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV30A0A087WSZ9 AF106564.1-201ENST00000607058 2553 ntBASIC16.64■□□□□ 0.25
TRAV30A0A087WSZ9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
TRAV30A0A087WSZ9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV30A0A087WSZ9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV30A0A087WSZ9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRAV30A0A087WSZ9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV30A0A087WSZ9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV30A0A087WSZ9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV30A0A087WSZ9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV30A0A087WSZ9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
TRAV30A0A087WSZ9 Z98882.1-201ENST00000622160 2253 ntBASIC16.64■□□□□ 0.25
TRAV30A0A087WSZ9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV30A0A087WSZ9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV30A0A087WSZ9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV30A0A087WSZ9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV30A0A087WSZ9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV30A0A087WSZ9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAV30A0A087WSZ9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRAV30A0A087WSZ9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV30A0A087WSZ9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV30A0A087WSZ9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV30A0A087WSZ9 AP004607.7-201ENST00000527152 1677 ntBASIC16.62■□□□□ 0.25
TRAV30A0A087WSZ9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAV30A0A087WSZ9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV30A0A087WSZ9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV30A0A087WSZ9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV30A0A087WSZ9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRAV30A0A087WSZ9 AC131281.2-201ENST00000520478 145 ntBASIC16.62■□□□□ 0.25
TRAV30A0A087WSZ9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV30A0A087WSZ9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms