Protein–RNA interactions for Protein: A0A075B6T6

TRAV12-2, T-cell receptor alpha variable 12-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-2A0A075B6T6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV12-2A0A075B6T6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 AC244015.2-201ENST00000616358 1861 ntBASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 AC027682.1-201ENST00000562846 899 ntBASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-2A0A075B6T6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 TSPY26P-201ENST00000476365 1326 ntBASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 AP001330.3-201ENST00000520123 633 ntBASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 IGHV3-19-201ENST00000521488 291 ntBASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-2A0A075B6T6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 EDA-201ENST00000338901 1233 ntBASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 AF213884.3-201ENST00000563833 479 ntBASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 AL034346.1-201ENST00000568244 1277 ntBASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 AL355001.2-201ENST00000620617 1191 ntBASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-2A0A075B6T6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV12-2A0A075B6T6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-2A0A075B6T6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-2A0A075B6T6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
TRAV12-2A0A075B6T6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-2A0A075B6T6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV12-2A0A075B6T6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRAV12-2A0A075B6T6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV12-2A0A075B6T6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms