Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RBFOX2-203ENST00000397303 1354 ntTSL 5 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 OR9G1-201ENST00000312153 918 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 MIRLET7I-201ENST00000362309 84 ntBASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 SNORA9B-201ENST00000384170 133 ntBASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 GRTP1-AS1-202ENST00000423246 465 ntTSL 5 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 SUCLA2-AS1-201ENST00000423869 552 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 RPL12P45-201ENST00000428087 478 ntBASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 SOX5-204ENST00000441133 638 ntTSL 2 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 AC005041.2-201ENST00000448783 982 ntBASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 AC016612.1-201ENST00000505367 289 ntBASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 SLA-206ENST00000517648 896 ntTSL 2 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 AC069120.3-201ENST00000519764 537 ntTSL 4 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 AC137579.1-201ENST00000519978 836 ntTSL 3 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 AC087752.3-201ENST00000523905 709 ntTSL 2 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 EMSY-217ENST00000533988 934 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 AC099518.2-201ENST00000565802 704 ntBASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 AC074050.4-201ENST00000614576 533 ntBASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 AC010618.3-204ENST00000615939 751 ntBASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 AL935212.4-201ENST00000618569 232 ntBASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 MIR8083-201ENST00000620823 89 ntBASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 AC003101.3-201ENST00000624452 768 ntBASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 TMC3-201ENST00000359440 4641 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 TFIP11-202ENST00000407148 2789 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 LINC01588-203ENST00000529902 4279 ntTSL 2 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 AL512770.1-202ENST00000421657 1914 ntTSL 5 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 IMMT-207ENST00000449247 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 ERCC6-203ENST00000447839 3411 ntTSL 2 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 CACNA1E-201ENST00000357570 7064 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 ADGRE2-209ENST00000596991 2596 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 ERBB3-201ENST00000267101 5919 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 CCDC144CP-202ENST00000433419 5227 ntBASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 MCM5-202ENST00000382011 2402 ntTSL 2 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 MTR-202ENST00000366577 10529 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 ZFYVE27-207ENST00000423811 3045 ntAPPRIS P4 TSL 5 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 ATG5-208ENST00000635758 3035 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 CDK20-204ENST00000375883 2301 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 SLC12A4-209ENST00000572037 3620 ntTSL 2 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 PLEC-204ENST00000354958 14751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 AHCTF1-202ENST00000366508 8751 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 NF1P6-201ENST00000426025 1649 ntBASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 PRRX1-207ENST00000497230 3501 ntTSL 2 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 PDPN-211ENST00000617617 2808 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 INTS9-201ENST00000416984 2759 ntTSL 2 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 CACNA1E-203ENST00000360108 6970 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 RAP1GAP-205ENST00000374763 3334 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 KIAA0907-202ENST00000368320 4499 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 ELP1-204ENST00000537196 3823 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 CPT1B-204ENST00000405237 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 PTOV1-AS1-202ENST00000600742 3181 ntTSL 2 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 LCTL-202ENST00000537670 2552 ntTSL 2 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 ATP6V1H-207ENST00000520188 1967 ntTSL 2 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 AC073176.2-201ENST00000603033 1963 ntTSL 5 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 TGM5-206ENST00000611276 2510 ntTSL 5 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 DDX3X-203ENST00000457138 5346 ntTSL 2 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 KDM8-201ENST00000286096 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 NAGA-202ENST00000402937 1869 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 FGF11-202ENST00000572907 2358 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 EPHB6-202ENST00000422643 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 GABRR1-201ENST00000369451 1823 ntTSL 5 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 PDE6C-201ENST00000371447 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 MRPL55-203ENST00000336520 744 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 HIST1H3J-201ENST00000359303 411 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 KCNK16-202ENST00000373229 1248 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 CNN2P4-201ENST00000396461 904 ntBASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 APOL4-204ENST00000397275 845 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 AC245060.2-201ENST00000412149 524 ntTSL 3 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 AC104772.2-201ENST00000412747 613 ntBASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 HMGN1P37-201ENST00000413805 303 ntBASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 AC092814.1-201ENST00000416056 386 ntBASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 SGO1-204ENST00000417364 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 RPL23P11-201ENST00000418077 411 ntBASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 SGO1-207ENST00000425061 1213 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 MRPL55-221ENST00000430433 864 ntTSL 5 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 AL450063.1-201ENST00000441775 244 ntBASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 SGO1-210ENST00000443724 931 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 AC010745.1-201ENST00000444804 637 ntTSL 3 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 SGO1-211ENST00000452020 1162 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 AP001625.1-202ENST00000455116 450 ntTSL 3 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 AC004674.1-201ENST00000458400 739 ntBASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 PHBP8-201ENST00000493810 725 ntBASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 RN7SL668P-201ENST00000493933 303 ntBASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 AC116049.1-201ENST00000505282 385 ntBASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 AC097487.1-201ENST00000514134 934 ntTSL 3 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 ADM-204ENST00000526492 641 ntTSL 3 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 SAA2-203ENST00000526900 687 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 AC073592.1-201ENST00000543970 1282 ntTSL 3 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 SAT2-208ENST00000573566 640 ntTSL 2 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 AP005203.1-202ENST00000584204 561 ntTSL 4 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 AC006027.1-201ENST00000608195 741 ntBASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 Vax2os1_3.1-201ENST00000622578 197 ntBASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 AC012065.5-201ENST00000624084 510 ntBASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 LINC00969-297ENST00000627767 929 ntTSL 2 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 CLP1-203ENST00000529430 1778 ntTSL 5 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 SLC14A1-204ENST00000436407 2264 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 DPP6-201ENST00000332007 3768 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 TNFAIP1-201ENST00000226225 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 843.5 ms