Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SCLT1-201ENST00000281142 3055 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 YWHAZ-207ENST00000395958 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 RCC1-204ENST00000398958 2715 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 TTTY1B-201ENST00000250776 910 ntTSL 2 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 TTTY1-201ENST00000250805 910 ntTSL 2 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 CD79B-202ENST00000349817 378 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 CD209-204ENST00000354397 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 SLC22A6-201ENST00000360421 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 IGHV4-28-201ENST00000390612 425 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 RPSAP25-201ENST00000412645 883 ntBASIC12.09□□□□□ -0.47
LMO3Q8TAP4 AL355802.1-201ENST00000417591 990 ntTSL 3 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 AC004231.1-201ENST00000418393 815 ntTSL 5 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 GOLGA6D-201ENST00000434739 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 AC108472.1-201ENST00000447277 618 ntTSL 3 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 AP000322.1-201ENST00000450895 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 PPP1R26-AS1-201ENST00000455039 643 ntTSL 4 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 AC004217.1-201ENST00000469026 794 ntBASIC12.09□□□□□ -0.47
LMO3Q8TAP4 ERICH6-AS1-203ENST00000475393 621 ntTSL 4 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 RN7SL709P-201ENST00000478855 300 ntBASIC12.09□□□□□ -0.47
LMO3Q8TAP4 SOX2-OT-212ENST00000491282 882 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 ARL15-205ENST00000507646 578 ntTSL 5 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 AC122719.2-201ENST00000511936 420 ntTSL 2 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 LINC01099-203ENST00000514736 758 ntTSL 2 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 MRPL57P7-201ENST00000518583 258 ntBASIC12.09□□□□□ -0.47
LMO3Q8TAP4 AC022558.3-201ENST00000616598 688 ntBASIC12.09□□□□□ -0.47
LMO3Q8TAP4 NCF4-AS1-202ENST00000619915 995 ntTSL 4 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 AC020765.4-201ENST00000621738 400 ntBASIC12.09□□□□□ -0.47
LMO3Q8TAP4 CU633980.2-201ENST00000624951 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 TRAPPC2L-215ENST00000625770 281 ntTSL 2 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 MIR3663HG-201ENST00000419373 2385 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 C8B-206ENST00000543257 2382 ntTSL 2 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 LINC02001-202ENST00000638682 1504 ntTSL 5 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 SULF2-211ENST00000484875 4238 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 FAM149A-206ENST00000503432 2011 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 AC022167.2-201ENST00000565934 2288 ntTSL 3 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 VPS4A-201ENST00000254950 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 CLDN4-202ENST00000431918 4108 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 CELF5-203ENST00000541430 4268 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 OCIAD1-203ENST00000396448 1306 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 LRTM1-202ENST00000493075 1318 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 NETO2-201ENST00000303155 3241 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 MET-201ENST00000318493 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 KXD1-217ENST00000602094 2738 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 UHRF1-207ENST00000624301 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
LMO3Q8TAP4 MRPS35-203ENST00000538315 1715 ntTSL 2 BASIC12.08□□□□□ -0.47
LMO3Q8TAP4 PAK6-213ENST00000560346 4020 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
LMO3Q8TAP4 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
LMO3Q8TAP4 ZNF141-204ENST00000505939 2146 ntTSL 5 BASIC12.08□□□□□ -0.47
LMO3Q8TAP4 MINOS1-210ENST00000617872 3678 ntTSL 2 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 ZKSCAN3-201ENST00000252211 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 TSPAN1-201ENST00000372003 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 BTBD18-202ENST00000436147 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 YIPF5-202ENST00000448443 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 BCAS3-217ENST00000588462 3559 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 AP1B1-205ENST00000415447 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 DPP6-201ENST00000332007 3768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 SGK494-201ENST00000301037 1233 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 AL590705.1-202ENST00000366109 578 ntTSL 3 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 RIPPLY2-201ENST00000369687 521 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 SEC14L2-201ENST00000402592 1229 ntTSL 2 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 AC006987.3-201ENST00000416843 406 ntBASIC12.08□□□□□ -0.48
LMO3Q8TAP4 AL360181.2-201ENST00000424450 626 ntTSL 5 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 MRPL52-205ENST00000432849 411 ntTSL 2 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 SLC25A5P5-201ENST00000435239 897 ntBASIC12.08□□□□□ -0.48
LMO3Q8TAP4 RPL37A-205ENST00000446558 495 ntTSL 5 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 PHBP5-201ENST00000449310 768 ntBASIC12.08□□□□□ -0.48
LMO3Q8TAP4 AC245102.1-201ENST00000454989 520 ntBASIC12.08□□□□□ -0.48
LMO3Q8TAP4 STAG3L1-202ENST00000456374 894 ntBASIC12.08□□□□□ -0.48
LMO3Q8TAP4 DLEU1-219ENST00000476738 838 ntTSL 5 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 AC079942.1-201ENST00000505557 384 ntTSL 3 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 OR4A18P-201ENST00000529103 1088 ntBASIC12.08□□□□□ -0.48
LMO3Q8TAP4 KRT16P1-202ENST00000577750 679 ntTSL 3 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 TMEM91-214ENST00000604123 757 ntTSL 3 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 LINC01002-226ENST00000633344 806 ntTSL 5 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 LINC01002-233ENST00000633773 609 ntTSL 5 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 AL160396.2-203ENST00000635901 877 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 UROD-221ENST00000636293 1102 ntTSL 5 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 FRMD5-212ENST00000636859 958 ntTSL 5 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC12.08□□□□□ -0.48
LMO3Q8TAP4 AL354702.2-203ENST00000641963 514 ntBASIC12.08□□□□□ -0.48
LMO3Q8TAP4 UVRAG-207ENST00000531818 3152 ntTSL 2 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 MIR100HG-223ENST00000636654 1434 ntTSL 5 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 AC092447.8-201ENST00000566570 4162 ntBASIC12.08□□□□□ -0.48
LMO3Q8TAP4 CAMKK2-216ENST00000545538 3797 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 RHBDD1-201ENST00000341329 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 PDLIM5-206ENST00000437932 5713 ntTSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 225.8 ms