Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
DNMT3AQ9Y6K1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
DNMT3AQ9Y6K1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.94■□□□□ 0.94
DNMT3AQ9Y6K1 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.94■□□□□ 0.94
DNMT3AQ9Y6K1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.94■□□□□ 0.94
DNMT3AQ9Y6K1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.94■□□□□ 0.94
DNMT3AQ9Y6K1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.94■□□□□ 0.94
DNMT3AQ9Y6K1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
DNMT3AQ9Y6K1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.94■□□□□ 0.94
DNMT3AQ9Y6K1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DNMT3AQ9Y6K1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
DNMT3AQ9Y6K1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
DNMT3AQ9Y6K1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DNMT3AQ9Y6K1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DNMT3AQ9Y6K1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DNMT3AQ9Y6K1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
DNMT3AQ9Y6K1 KRT19P1-201ENST00000405746 1186 ntBASIC20.93■□□□□ 0.94
DNMT3AQ9Y6K1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.93■□□□□ 0.94
DNMT3AQ9Y6K1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DNMT3AQ9Y6K1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DNMT3AQ9Y6K1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DNMT3AQ9Y6K1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
DNMT3AQ9Y6K1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.93■□□□□ 0.94
DNMT3AQ9Y6K1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DNMT3AQ9Y6K1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.93■□□□□ 0.94
DNMT3AQ9Y6K1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DNMT3AQ9Y6K1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DNMT3AQ9Y6K1 AL117328.2-201ENST00000624617 1940 ntBASIC20.92■□□□□ 0.94
DNMT3AQ9Y6K1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DNMT3AQ9Y6K1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DNMT3AQ9Y6K1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.92■□□□□ 0.94
DNMT3AQ9Y6K1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.92■□□□□ 0.94
DNMT3AQ9Y6K1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.92■□□□□ 0.94
DNMT3AQ9Y6K1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.92■□□□□ 0.94
DNMT3AQ9Y6K1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.92■□□□□ 0.94
DNMT3AQ9Y6K1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DNMT3AQ9Y6K1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DNMT3AQ9Y6K1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DNMT3AQ9Y6K1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
DNMT3AQ9Y6K1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
DNMT3AQ9Y6K1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DNMT3AQ9Y6K1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DNMT3AQ9Y6K1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DNMT3AQ9Y6K1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DNMT3AQ9Y6K1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
DNMT3AQ9Y6K1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DNMT3AQ9Y6K1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.91■□□□□ 0.94
DNMT3AQ9Y6K1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.91■□□□□ 0.94
DNMT3AQ9Y6K1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
DNMT3AQ9Y6K1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.91■□□□□ 0.94
DNMT3AQ9Y6K1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
DNMT3AQ9Y6K1 EEF1DP3-203ENST00000566025 782 ntBASIC20.91■□□□□ 0.94
DNMT3AQ9Y6K1 AC104564.3-201ENST00000582367 638 ntBASIC20.91■□□□□ 0.94
DNMT3AQ9Y6K1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DNMT3AQ9Y6K1 AC053503.5-201ENST00000601508 636 ntBASIC20.91■□□□□ 0.94
DNMT3AQ9Y6K1 AC004854.2-201ENST00000608450 1441 ntBASIC20.91■□□□□ 0.94
DNMT3AQ9Y6K1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DNMT3AQ9Y6K1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.91■□□□□ 0.94
DNMT3AQ9Y6K1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DNMT3AQ9Y6K1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DNMT3AQ9Y6K1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.9■□□□□ 0.94
DNMT3AQ9Y6K1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.9■□□□□ 0.94
DNMT3AQ9Y6K1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.9■□□□□ 0.94
DNMT3AQ9Y6K1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DNMT3AQ9Y6K1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DNMT3AQ9Y6K1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DNMT3AQ9Y6K1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DNMT3AQ9Y6K1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
DNMT3AQ9Y6K1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DNMT3AQ9Y6K1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
DNMT3AQ9Y6K1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
DNMT3AQ9Y6K1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
DNMT3AQ9Y6K1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DNMT3AQ9Y6K1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
DNMT3AQ9Y6K1 FAM99A-202ENST00000538190 1989 ntBASIC20.89■□□□□ 0.93
DNMT3AQ9Y6K1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DNMT3AQ9Y6K1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
DNMT3AQ9Y6K1 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.89■□□□□ 0.93
DNMT3AQ9Y6K1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
DNMT3AQ9Y6K1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.89■□□□□ 0.93
DNMT3AQ9Y6K1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.89■□□□□ 0.93
DNMT3AQ9Y6K1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
DNMT3AQ9Y6K1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
DNMT3AQ9Y6K1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DNMT3AQ9Y6K1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DNMT3AQ9Y6K1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DNMT3AQ9Y6K1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
DNMT3AQ9Y6K1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DNMT3AQ9Y6K1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DNMT3AQ9Y6K1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
DNMT3AQ9Y6K1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.88■□□□□ 0.93
DNMT3AQ9Y6K1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.88■□□□□ 0.93
DNMT3AQ9Y6K1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
DNMT3AQ9Y6K1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
DNMT3AQ9Y6K1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
DNMT3AQ9Y6K1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
DNMT3AQ9Y6K1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.88■□□□□ 0.93
DNMT3AQ9Y6K1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.88■□□□□ 0.93
DNMT3AQ9Y6K1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.88■□□□□ 0.93
DNMT3AQ9Y6K1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms