Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.49■■□□□ 1.19
HCFC2Q9Y5Z7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HCFC2Q9Y5Z7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.49■■□□□ 1.19
HCFC2Q9Y5Z7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.49■■□□□ 1.19
HCFC2Q9Y5Z7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.49■■□□□ 1.19
HCFC2Q9Y5Z7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.49■■□□□ 1.19
HCFC2Q9Y5Z7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.49■■□□□ 1.19
HCFC2Q9Y5Z7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.49■■□□□ 1.19
HCFC2Q9Y5Z7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.49■■□□□ 1.19
HCFC2Q9Y5Z7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.49■■□□□ 1.19
HCFC2Q9Y5Z7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HCFC2Q9Y5Z7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
HCFC2Q9Y5Z7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HCFC2Q9Y5Z7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
HCFC2Q9Y5Z7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
HCFC2Q9Y5Z7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
HCFC2Q9Y5Z7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.48■■□□□ 1.19
HCFC2Q9Y5Z7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HCFC2Q9Y5Z7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.48■■□□□ 1.19
HCFC2Q9Y5Z7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HCFC2Q9Y5Z7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.48■■□□□ 1.19
HCFC2Q9Y5Z7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
HCFC2Q9Y5Z7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.48■■□□□ 1.19
HCFC2Q9Y5Z7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HCFC2Q9Y5Z7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
HCFC2Q9Y5Z7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HCFC2Q9Y5Z7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HCFC2Q9Y5Z7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HCFC2Q9Y5Z7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
HCFC2Q9Y5Z7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HCFC2Q9Y5Z7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
HCFC2Q9Y5Z7 BX276092.2-201ENST00000417668 665 ntBASIC22.47■■□□□ 1.19
HCFC2Q9Y5Z7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.47■■□□□ 1.19
HCFC2Q9Y5Z7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
HCFC2Q9Y5Z7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
HCFC2Q9Y5Z7 RARRES2P4-201ENST00000514074 484 ntBASIC22.47■■□□□ 1.19
HCFC2Q9Y5Z7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.47■■□□□ 1.19
HCFC2Q9Y5Z7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.47■■□□□ 1.19
HCFC2Q9Y5Z7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HCFC2Q9Y5Z7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HCFC2Q9Y5Z7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
HCFC2Q9Y5Z7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HCFC2Q9Y5Z7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HCFC2Q9Y5Z7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
HCFC2Q9Y5Z7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
HCFC2Q9Y5Z7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
HCFC2Q9Y5Z7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
HCFC2Q9Y5Z7 RPS2P52-201ENST00000469610 820 ntBASIC22.46■■□□□ 1.19
HCFC2Q9Y5Z7 AC083880.1-201ENST00000608266 535 ntBASIC22.46■■□□□ 1.19
HCFC2Q9Y5Z7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HCFC2Q9Y5Z7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
HCFC2Q9Y5Z7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HCFC2Q9Y5Z7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HCFC2Q9Y5Z7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.45■■□□□ 1.19
HCFC2Q9Y5Z7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HCFC2Q9Y5Z7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.45■■□□□ 1.18
HCFC2Q9Y5Z7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HCFC2Q9Y5Z7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.45■■□□□ 1.18
HCFC2Q9Y5Z7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.45■■□□□ 1.18
HCFC2Q9Y5Z7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.45■■□□□ 1.18
HCFC2Q9Y5Z7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HCFC2Q9Y5Z7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HCFC2Q9Y5Z7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.45■■□□□ 1.18
HCFC2Q9Y5Z7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HCFC2Q9Y5Z7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HCFC2Q9Y5Z7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HCFC2Q9Y5Z7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HCFC2Q9Y5Z7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HCFC2Q9Y5Z7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HCFC2Q9Y5Z7 AC098590.1-201ENST00000468126 897 ntBASIC22.44■■□□□ 1.18
HCFC2Q9Y5Z7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HCFC2Q9Y5Z7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HCFC2Q9Y5Z7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.44■■□□□ 1.18
HCFC2Q9Y5Z7 MYC-209ENST00000641252 345 ntBASIC22.44■■□□□ 1.18
HCFC2Q9Y5Z7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HCFC2Q9Y5Z7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.43■■□□□ 1.18
HCFC2Q9Y5Z7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.43■■□□□ 1.18
HCFC2Q9Y5Z7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HCFC2Q9Y5Z7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HCFC2Q9Y5Z7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HCFC2Q9Y5Z7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HCFC2Q9Y5Z7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HCFC2Q9Y5Z7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HCFC2Q9Y5Z7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.43■■□□□ 1.18
HCFC2Q9Y5Z7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.43■■□□□ 1.18
HCFC2Q9Y5Z7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.43■■□□□ 1.18
HCFC2Q9Y5Z7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.43■■□□□ 1.18
HCFC2Q9Y5Z7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.43■■□□□ 1.18
HCFC2Q9Y5Z7 AC008175.2-201ENST00000612840 297 ntBASIC22.43■■□□□ 1.18
HCFC2Q9Y5Z7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.43■■□□□ 1.18
HCFC2Q9Y5Z7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.43■■□□□ 1.18
HCFC2Q9Y5Z7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.43■■□□□ 1.18
HCFC2Q9Y5Z7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
HCFC2Q9Y5Z7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HCFC2Q9Y5Z7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
HCFC2Q9Y5Z7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HCFC2Q9Y5Z7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
HCFC2Q9Y5Z7 DUSP5P2-201ENST00000426873 1033 ntBASIC22.42■■□□□ 1.18
HCFC2Q9Y5Z7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.42■■□□□ 1.18
HCFC2Q9Y5Z7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms