Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 AC079089.2-201ENST00000531211 1277 ntBASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX11Q9Y5W9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX11Q9Y5W9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNX11Q9Y5W9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.16■□□□□ 0.98
SNX11Q9Y5W9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX11Q9Y5W9 CNN2P6-201ENST00000439038 900 ntBASIC21.16■□□□□ 0.98
SNX11Q9Y5W9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.16■□□□□ 0.98
SNX11Q9Y5W9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.16■□□□□ 0.98
SNX11Q9Y5W9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX11Q9Y5W9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNX11Q9Y5W9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNX11Q9Y5W9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX11Q9Y5W9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX11Q9Y5W9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.15■□□□□ 0.98
SNX11Q9Y5W9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX11Q9Y5W9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.15■□□□□ 0.98
SNX11Q9Y5W9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.15■□□□□ 0.98
SNX11Q9Y5W9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.15■□□□□ 0.98
SNX11Q9Y5W9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX11Q9Y5W9 AP004607.7-201ENST00000527152 1677 ntBASIC21.15■□□□□ 0.98
SNX11Q9Y5W9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX11Q9Y5W9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNX11Q9Y5W9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SNX11Q9Y5W9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SNX11Q9Y5W9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.98
SNX11Q9Y5W9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SNX11Q9Y5W9 LINC01960-201ENST00000563759 1884 ntBASIC21.14■□□□□ 0.97
SNX11Q9Y5W9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX11Q9Y5W9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SNX11Q9Y5W9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX11Q9Y5W9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.14■□□□□ 0.97
SNX11Q9Y5W9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX11Q9Y5W9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX11Q9Y5W9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
SNX11Q9Y5W9 AC010141.2-201ENST00000452426 721 ntBASIC21.14■□□□□ 0.97
SNX11Q9Y5W9 AF201337.1-201ENST00000520239 748 ntBASIC21.14■□□□□ 0.97
SNX11Q9Y5W9 AC010536.3-201ENST00000620306 533 ntBASIC21.14■□□□□ 0.97
SNX11Q9Y5W9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX11Q9Y5W9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX11Q9Y5W9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SNX11Q9Y5W9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX11Q9Y5W9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.13■□□□□ 0.97
SNX11Q9Y5W9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.13■□□□□ 0.97
SNX11Q9Y5W9 AC105036.2-201ENST00000569468 176 ntBASIC21.13■□□□□ 0.97
SNX11Q9Y5W9 AC138907.5-202ENST00000569484 235 ntBASIC21.13■□□□□ 0.97
SNX11Q9Y5W9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX11Q9Y5W9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX11Q9Y5W9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SNX11Q9Y5W9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX11Q9Y5W9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX11Q9Y5W9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
SNX11Q9Y5W9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SNX11Q9Y5W9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.13■□□□□ 0.97
SNX11Q9Y5W9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNX11Q9Y5W9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.12■□□□□ 0.97
SNX11Q9Y5W9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SNX11Q9Y5W9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNX11Q9Y5W9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNX11Q9Y5W9 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNX11Q9Y5W9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNX11Q9Y5W9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.12■□□□□ 0.97
SNX11Q9Y5W9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.12■□□□□ 0.97
SNX11Q9Y5W9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.12■□□□□ 0.97
SNX11Q9Y5W9 MIR4651-201ENST00000582622 73 ntBASIC21.12■□□□□ 0.97
SNX11Q9Y5W9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SNX11Q9Y5W9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNX11Q9Y5W9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNX11Q9Y5W9 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.11■□□□□ 0.97
SNX11Q9Y5W9 AC069152.1-201ENST00000438030 544 ntBASIC21.11■□□□□ 0.97
SNX11Q9Y5W9 KRT18P20-201ENST00000548986 1279 ntBASIC21.11■□□□□ 0.97
SNX11Q9Y5W9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SNX11Q9Y5W9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.11■□□□□ 0.97
SNX11Q9Y5W9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNX11Q9Y5W9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.11■□□□□ 0.97
SNX11Q9Y5W9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.11■□□□□ 0.97
SNX11Q9Y5W9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.11■□□□□ 0.97
SNX11Q9Y5W9 AC066615.1-201ENST00000640911 628 ntBASIC21.11■□□□□ 0.97
SNX11Q9Y5W9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNX11Q9Y5W9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNX11Q9Y5W9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.11■□□□□ 0.97
SNX11Q9Y5W9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms