Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 AP004607.4-201ENST00000530158 1459 ntBASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA6Q9Y5G7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA6Q9Y5G7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA6Q9Y5G7 AL353803.4-201ENST00000565882 1934 ntBASIC20.53■□□□□ 0.88
PCDHGA6Q9Y5G7 AL137060.1-201ENST00000618151 2648 ntBASIC20.53■□□□□ 0.88
PCDHGA6Q9Y5G7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PCDHGA6Q9Y5G7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHGA6Q9Y5G7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
PCDHGA6Q9Y5G7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDHGA6Q9Y5G7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA6Q9Y5G7 AC016769.1-201ENST00000409132 1010 ntBASIC20.53■□□□□ 0.88
PCDHGA6Q9Y5G7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA6Q9Y5G7 AC080038.1-201ENST00000611274 1154 ntBASIC20.53■□□□□ 0.88
PCDHGA6Q9Y5G7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA6Q9Y5G7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA6Q9Y5G7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
PCDHGA6Q9Y5G7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA6Q9Y5G7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA6Q9Y5G7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
PCDHGA6Q9Y5G7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PCDHGA6Q9Y5G7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA6Q9Y5G7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA6Q9Y5G7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDHGA6Q9Y5G7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA6Q9Y5G7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PCDHGA6Q9Y5G7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHGA6Q9Y5G7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDHGA6Q9Y5G7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PCDHGA6Q9Y5G7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA6Q9Y5G7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PCDHGA6Q9Y5G7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHGA6Q9Y5G7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 RAP2CP1-201ENST00000605103 478 ntBASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 AC004854.2-201ENST00000608450 1441 ntBASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA6Q9Y5G7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGA6Q9Y5G7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGA6Q9Y5G7 OXCT2P1-201ENST00000447263 1535 ntBASIC20.5■□□□□ 0.87
PCDHGA6Q9Y5G7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA6Q9Y5G7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDHGA6Q9Y5G7 KRT19P1-201ENST00000405746 1186 ntBASIC20.5■□□□□ 0.87
PCDHGA6Q9Y5G7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDHGA6Q9Y5G7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PCDHGA6Q9Y5G7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGA6Q9Y5G7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDHGA6Q9Y5G7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDHGA6Q9Y5G7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDHGA6Q9Y5G7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGA6Q9Y5G7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGA6Q9Y5G7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGA6Q9Y5G7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA6Q9Y5G7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA6Q9Y5G7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA6Q9Y5G7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA6Q9Y5G7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PCDHGA6Q9Y5G7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA6Q9Y5G7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA6Q9Y5G7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA6Q9Y5G7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA6Q9Y5G7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA6Q9Y5G7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA6Q9Y5G7 AC139530.1-201ENST00000575312 1977 ntBASIC20.48■□□□□ 0.87
PCDHGA6Q9Y5G7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PCDHGA6Q9Y5G7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA6Q9Y5G7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA6Q9Y5G7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA6Q9Y5G7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PCDHGA6Q9Y5G7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
PCDHGA6Q9Y5G7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.48■□□□□ 0.87
PCDHGA6Q9Y5G7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHGA6Q9Y5G7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA6Q9Y5G7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA6Q9Y5G7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA6Q9Y5G7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA6Q9Y5G7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms