Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 OR2I1P-207ENST00000453522 948 ntBASIC18.97■□□□□ 0.63
COPS3Q9UNS2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
COPS3Q9UNS2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COPS3Q9UNS2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPS3Q9UNS2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COPS3Q9UNS2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPS3Q9UNS2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.96■□□□□ 0.63
COPS3Q9UNS2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPS3Q9UNS2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COPS3Q9UNS2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COPS3Q9UNS2 AC104564.3-201ENST00000582367 638 ntBASIC18.96■□□□□ 0.63
COPS3Q9UNS2 AL356740.2-201ENST00000601559 647 ntBASIC18.96■□□□□ 0.63
COPS3Q9UNS2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPS3Q9UNS2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPS3Q9UNS2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPS3Q9UNS2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPS3Q9UNS2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPS3Q9UNS2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPS3Q9UNS2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COPS3Q9UNS2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPS3Q9UNS2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COPS3Q9UNS2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPS3Q9UNS2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COPS3Q9UNS2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPS3Q9UNS2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPS3Q9UNS2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPS3Q9UNS2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COPS3Q9UNS2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COPS3Q9UNS2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
COPS3Q9UNS2 AC010525.1-201ENST00000585559 441 ntBASIC18.95■□□□□ 0.62
COPS3Q9UNS2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
COPS3Q9UNS2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.95■□□□□ 0.62
COPS3Q9UNS2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COPS3Q9UNS2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPS3Q9UNS2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.95■□□□□ 0.62
COPS3Q9UNS2 AC092667.1-201ENST00000434301 2586 ntBASIC18.94■□□□□ 0.62
COPS3Q9UNS2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
COPS3Q9UNS2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.94■□□□□ 0.62
COPS3Q9UNS2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPS3Q9UNS2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.94■□□□□ 0.62
COPS3Q9UNS2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPS3Q9UNS2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
COPS3Q9UNS2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPS3Q9UNS2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.94■□□□□ 0.62
COPS3Q9UNS2 MIR3621-201ENST00000580529 85 ntBASIC18.94■□□□□ 0.62
COPS3Q9UNS2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
COPS3Q9UNS2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.94■□□□□ 0.62
COPS3Q9UNS2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COPS3Q9UNS2 AC068587.7-201ENST00000641602 218 ntBASIC18.94■□□□□ 0.62
COPS3Q9UNS2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPS3Q9UNS2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPS3Q9UNS2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPS3Q9UNS2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPS3Q9UNS2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.94■□□□□ 0.62
COPS3Q9UNS2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPS3Q9UNS2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 AL035685.1-201ENST00000636663 812 ntBASIC18.93■□□□□ 0.62
COPS3Q9UNS2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPS3Q9UNS2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.92■□□□□ 0.62
COPS3Q9UNS2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPS3Q9UNS2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms