Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF346Q9UL40 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF346Q9UL40 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.17■□□□□ 0.66
ZNF346Q9UL40 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF346Q9UL40 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF346Q9UL40 AC106739.1-201ENST00000617035 715 ntBASIC19.17■□□□□ 0.66
ZNF346Q9UL40 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF346Q9UL40 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ZNF346Q9UL40 AC135279.3-201ENST00000610945 1311 ntBASIC19.17■□□□□ 0.66
ZNF346Q9UL40 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF346Q9UL40 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF346Q9UL40 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF346Q9UL40 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 AC104564.3-201ENST00000582367 638 ntBASIC19.16■□□□□ 0.66
ZNF346Q9UL40 AC233992.3-201ENST00000607491 485 ntBASIC19.16■□□□□ 0.66
ZNF346Q9UL40 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 AF106564.1-201ENST00000607058 2553 ntBASIC19.16■□□□□ 0.66
ZNF346Q9UL40 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF346Q9UL40 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF346Q9UL40 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF346Q9UL40 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF346Q9UL40 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF346Q9UL40 Z98882.1-201ENST00000622160 2253 ntBASIC19.15■□□□□ 0.66
ZNF346Q9UL40 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ZNF346Q9UL40 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF346Q9UL40 MIR638-201ENST00000385237 100 ntBASIC19.15■□□□□ 0.66
ZNF346Q9UL40 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.15■□□□□ 0.66
ZNF346Q9UL40 AL034346.1-201ENST00000568244 1277 ntBASIC19.15■□□□□ 0.66
ZNF346Q9UL40 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF346Q9UL40 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
ZNF346Q9UL40 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF346Q9UL40 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF346Q9UL40 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF346Q9UL40 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF346Q9UL40 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF346Q9UL40 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.14■□□□□ 0.65
ZNF346Q9UL40 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF346Q9UL40 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ZNF346Q9UL40 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF346Q9UL40 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF346Q9UL40 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.14■□□□□ 0.65
ZNF346Q9UL40 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF346Q9UL40 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ZNF346Q9UL40 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.14■□□□□ 0.65
ZNF346Q9UL40 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF346Q9UL40 AC019069.1-201ENST00000610008 1333 ntBASIC19.14■□□□□ 0.65
ZNF346Q9UL40 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.14■□□□□ 0.65
ZNF346Q9UL40 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF346Q9UL40 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ZNF346Q9UL40 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.13■□□□□ 0.65
ZNF346Q9UL40 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF346Q9UL40 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF346Q9UL40 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF346Q9UL40 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.13■□□□□ 0.65
ZNF346Q9UL40 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF346Q9UL40 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
ZNF346Q9UL40 AC126544.1-201ENST00000580842 1059 ntBASIC19.13■□□□□ 0.65
ZNF346Q9UL40 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ZNF346Q9UL40 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.13■□□□□ 0.65
ZNF346Q9UL40 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF346Q9UL40 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.13■□□□□ 0.65
ZNF346Q9UL40 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF346Q9UL40 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF346Q9UL40 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF346Q9UL40 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF346Q9UL40 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF346Q9UL40 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF346Q9UL40 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF346Q9UL40 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF346Q9UL40 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF346Q9UL40 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.12■□□□□ 0.65
ZNF346Q9UL40 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF346Q9UL40 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.12■□□□□ 0.65
ZNF346Q9UL40 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF346Q9UL40 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF346Q9UL40 EDA-201ENST00000338901 1233 ntBASIC19.12■□□□□ 0.65
ZNF346Q9UL40 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF346Q9UL40 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ZNF346Q9UL40 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF346Q9UL40 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF346Q9UL40 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF346Q9UL40 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF346Q9UL40 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms