Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTSFQ9UBX1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.11■□□□□ 0.81
CTSFQ9UBX1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTSFQ9UBX1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CTSFQ9UBX1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.11■□□□□ 0.81
CTSFQ9UBX1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTSFQ9UBX1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTSFQ9UBX1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.11■□□□□ 0.81
CTSFQ9UBX1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTSFQ9UBX1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CTSFQ9UBX1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTSFQ9UBX1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.11■□□□□ 0.81
CTSFQ9UBX1 BID-214ENST00000617586 542 ntTSL 5 BASIC20.11■□□□□ 0.81
CTSFQ9UBX1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTSFQ9UBX1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTSFQ9UBX1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.11■□□□□ 0.81
CTSFQ9UBX1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CTSFQ9UBX1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CTSFQ9UBX1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSFQ9UBX1 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.1■□□□□ 0.81
CTSFQ9UBX1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSFQ9UBX1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTSFQ9UBX1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSFQ9UBX1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSFQ9UBX1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.1■□□□□ 0.81
CTSFQ9UBX1 AP001160.3-201ENST00000601484 763 ntBASIC20.1■□□□□ 0.81
CTSFQ9UBX1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CTSFQ9UBX1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CTSFQ9UBX1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTSFQ9UBX1 AC127496.7-201ENST00000625110 1798 ntBASIC20.1■□□□□ 0.81
CTSFQ9UBX1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSFQ9UBX1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSFQ9UBX1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTSFQ9UBX1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.1■□□□□ 0.81
CTSFQ9UBX1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTSFQ9UBX1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTSFQ9UBX1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.09■□□□□ 0.81
CTSFQ9UBX1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTSFQ9UBX1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.09■□□□□ 0.81
CTSFQ9UBX1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.09■□□□□ 0.81
CTSFQ9UBX1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTSFQ9UBX1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTSFQ9UBX1 AC012676.1-201ENST00000574705 1949 ntBASIC20.09■□□□□ 0.81
CTSFQ9UBX1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CTSFQ9UBX1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTSFQ9UBX1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CTSFQ9UBX1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.08■□□□□ 0.81
CTSFQ9UBX1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTSFQ9UBX1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTSFQ9UBX1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.08■□□□□ 0.81
CTSFQ9UBX1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTSFQ9UBX1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.08■□□□□ 0.81
CTSFQ9UBX1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.08■□□□□ 0.81
CTSFQ9UBX1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.08■□□□□ 0.81
CTSFQ9UBX1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTSFQ9UBX1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
CTSFQ9UBX1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.08■□□□□ 0.81
CTSFQ9UBX1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTSFQ9UBX1 AC073111.5-205ENST00000641717 521 ntBASIC20.08■□□□□ 0.81
CTSFQ9UBX1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CTSFQ9UBX1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTSFQ9UBX1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTSFQ9UBX1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTSFQ9UBX1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
CTSFQ9UBX1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.08■□□□□ 0.8
CTSFQ9UBX1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.08■□□□□ 0.8
CTSFQ9UBX1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSFQ9UBX1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSFQ9UBX1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSFQ9UBX1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSFQ9UBX1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTSFQ9UBX1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSFQ9UBX1 KRT18P11-201ENST00000435214 1283 ntBASIC20.07■□□□□ 0.8
CTSFQ9UBX1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.07■□□□□ 0.8
CTSFQ9UBX1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.07■□□□□ 0.8
CTSFQ9UBX1 UBE2DNL-204ENST00000602536 740 ntBASIC20.07■□□□□ 0.8
CTSFQ9UBX1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.07■□□□□ 0.8
CTSFQ9UBX1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.07■□□□□ 0.8
CTSFQ9UBX1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSFQ9UBX1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CTSFQ9UBX1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSFQ9UBX1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTSFQ9UBX1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSFQ9UBX1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSFQ9UBX1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSFQ9UBX1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTSFQ9UBX1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTSFQ9UBX1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSFQ9UBX1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSFQ9UBX1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.06■□□□□ 0.8
CTSFQ9UBX1 CDCA4P2-201ENST00000441182 718 ntBASIC20.06■□□□□ 0.8
CTSFQ9UBX1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.06■□□□□ 0.8
CTSFQ9UBX1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTSFQ9UBX1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSFQ9UBX1 RAP2CP1-201ENST00000605103 478 ntBASIC20.06■□□□□ 0.8
CTSFQ9UBX1 AC011767.1-201ENST00000617410 1153 ntBASIC20.06■□□□□ 0.8
CTSFQ9UBX1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTSFQ9UBX1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSFQ9UBX1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTSFQ9UBX1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms