Protein–RNA interactions for Protein: Q9NZ43

USE1, Vesicle transport protein USE1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USE1Q9NZ43 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
USE1Q9NZ43 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.78■□□□□ 0.76
USE1Q9NZ43 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USE1Q9NZ43 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
USE1Q9NZ43 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
USE1Q9NZ43 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
USE1Q9NZ43 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
USE1Q9NZ43 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
USE1Q9NZ43 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USE1Q9NZ43 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.78■□□□□ 0.76
USE1Q9NZ43 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
USE1Q9NZ43 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
USE1Q9NZ43 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.78■□□□□ 0.76
USE1Q9NZ43 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
USE1Q9NZ43 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USE1Q9NZ43 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.78■□□□□ 0.76
USE1Q9NZ43 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
USE1Q9NZ43 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.78■□□□□ 0.76
USE1Q9NZ43 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USE1Q9NZ43 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USE1Q9NZ43 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USE1Q9NZ43 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
USE1Q9NZ43 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USE1Q9NZ43 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USE1Q9NZ43 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.77■□□□□ 0.76
USE1Q9NZ43 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
USE1Q9NZ43 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
USE1Q9NZ43 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
USE1Q9NZ43 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
USE1Q9NZ43 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USE1Q9NZ43 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.77■□□□□ 0.76
USE1Q9NZ43 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USE1Q9NZ43 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
USE1Q9NZ43 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.76■□□□□ 0.75
USE1Q9NZ43 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
USE1Q9NZ43 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USE1Q9NZ43 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USE1Q9NZ43 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USE1Q9NZ43 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USE1Q9NZ43 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
USE1Q9NZ43 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.76■□□□□ 0.75
USE1Q9NZ43 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USE1Q9NZ43 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
USE1Q9NZ43 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USE1Q9NZ43 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.76■□□□□ 0.75
USE1Q9NZ43 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USE1Q9NZ43 PVT1_1.1-201ENST00000615125 194 ntBASIC19.76■□□□□ 0.75
USE1Q9NZ43 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.76■□□□□ 0.75
USE1Q9NZ43 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.76■□□□□ 0.75
USE1Q9NZ43 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
USE1Q9NZ43 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
USE1Q9NZ43 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USE1Q9NZ43 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
USE1Q9NZ43 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USE1Q9NZ43 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.75■□□□□ 0.75
USE1Q9NZ43 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.75■□□□□ 0.75
USE1Q9NZ43 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USE1Q9NZ43 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USE1Q9NZ43 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USE1Q9NZ43 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
USE1Q9NZ43 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USE1Q9NZ43 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
USE1Q9NZ43 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
USE1Q9NZ43 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.75■□□□□ 0.75
USE1Q9NZ43 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
USE1Q9NZ43 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.75■□□□□ 0.75
USE1Q9NZ43 DUX4L18-201ENST00000553347 1267 ntBASIC19.75■□□□□ 0.75
USE1Q9NZ43 MIR6722-201ENST00000617286 78 ntBASIC19.75■□□□□ 0.75
USE1Q9NZ43 AC074183.2-201ENST00000623112 922 ntBASIC19.75■□□□□ 0.75
USE1Q9NZ43 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.75■□□□□ 0.75
USE1Q9NZ43 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USE1Q9NZ43 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.75■□□□□ 0.75
USE1Q9NZ43 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.75■□□□□ 0.75
USE1Q9NZ43 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.75■□□□□ 0.75
USE1Q9NZ43 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.75■□□□□ 0.75
USE1Q9NZ43 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.75■□□□□ 0.75
USE1Q9NZ43 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
USE1Q9NZ43 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.75■□□□□ 0.75
USE1Q9NZ43 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.75■□□□□ 0.75
USE1Q9NZ43 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USE1Q9NZ43 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USE1Q9NZ43 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
USE1Q9NZ43 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
USE1Q9NZ43 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
USE1Q9NZ43 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USE1Q9NZ43 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USE1Q9NZ43 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
USE1Q9NZ43 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USE1Q9NZ43 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
USE1Q9NZ43 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
USE1Q9NZ43 AC012354.3-201ENST00000623734 483 ntBASIC19.74■□□□□ 0.75
USE1Q9NZ43 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
USE1Q9NZ43 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USE1Q9NZ43 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USE1Q9NZ43 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USE1Q9NZ43 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USE1Q9NZ43 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
USE1Q9NZ43 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USE1Q9NZ43 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USE1Q9NZ43 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms