Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.75■□□□□ 0.75
SMPD3Q9NY59 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD3Q9NY59 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.75■□□□□ 0.75
SMPD3Q9NY59 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.75■□□□□ 0.75
SMPD3Q9NY59 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.75■□□□□ 0.75
SMPD3Q9NY59 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.75■□□□□ 0.75
SMPD3Q9NY59 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
SMPD3Q9NY59 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
SMPD3Q9NY59 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD3Q9NY59 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
SMPD3Q9NY59 AC139795.1-202ENST00000500444 432 ntBASIC19.74■□□□□ 0.75
SMPD3Q9NY59 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.74■□□□□ 0.75
SMPD3Q9NY59 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SMPD3Q9NY59 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SMPD3Q9NY59 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD3Q9NY59 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD3Q9NY59 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD3Q9NY59 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMPD3Q9NY59 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.73■□□□□ 0.75
SMPD3Q9NY59 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.73■□□□□ 0.75
SMPD3Q9NY59 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMPD3Q9NY59 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SMPD3Q9NY59 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMPD3Q9NY59 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SMPD3Q9NY59 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.73■□□□□ 0.75
SMPD3Q9NY59 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMPD3Q9NY59 AP005212.1-201ENST00000581547 1997 ntBASIC19.73■□□□□ 0.75
SMPD3Q9NY59 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMPD3Q9NY59 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SMPD3Q9NY59 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMPD3Q9NY59 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.73■□□□□ 0.75
SMPD3Q9NY59 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.73■□□□□ 0.75
SMPD3Q9NY59 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SMPD3Q9NY59 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.73■□□□□ 0.75
SMPD3Q9NY59 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.72■□□□□ 0.75
SMPD3Q9NY59 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMPD3Q9NY59 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMPD3Q9NY59 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMPD3Q9NY59 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SMPD3Q9NY59 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.72■□□□□ 0.75
SMPD3Q9NY59 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.72■□□□□ 0.75
SMPD3Q9NY59 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SMPD3Q9NY59 AL391422.3-201ENST00000603791 2761 ntBASIC19.72■□□□□ 0.75
SMPD3Q9NY59 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMPD3Q9NY59 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
SMPD3Q9NY59 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMPD3Q9NY59 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.71■□□□□ 0.75
SMPD3Q9NY59 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
SMPD3Q9NY59 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SMPD3Q9NY59 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SMPD3Q9NY59 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMPD3Q9NY59 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.71■□□□□ 0.75
SMPD3Q9NY59 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMPD3Q9NY59 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMPD3Q9NY59 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMPD3Q9NY59 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMPD3Q9NY59 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.71■□□□□ 0.75
SMPD3Q9NY59 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SMPD3Q9NY59 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SMPD3Q9NY59 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMPD3Q9NY59 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.7■□□□□ 0.74
SMPD3Q9NY59 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD3Q9NY59 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.7■□□□□ 0.74
SMPD3Q9NY59 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SMPD3Q9NY59 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SMPD3Q9NY59 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD3Q9NY59 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.7■□□□□ 0.74
SMPD3Q9NY59 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD3Q9NY59 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.7■□□□□ 0.74
SMPD3Q9NY59 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SMPD3Q9NY59 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD3Q9NY59 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD3Q9NY59 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD3Q9NY59 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD3Q9NY59 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD3Q9NY59 AC005703.6-201ENST00000623265 1329 ntBASIC19.7■□□□□ 0.74
SMPD3Q9NY59 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.7■□□□□ 0.74
SMPD3Q9NY59 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD3Q9NY59 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.7■□□□□ 0.74
SMPD3Q9NY59 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD3Q9NY59 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.69■□□□□ 0.74
SMPD3Q9NY59 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.69■□□□□ 0.74
SMPD3Q9NY59 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.69■□□□□ 0.74
SMPD3Q9NY59 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SMPD3Q9NY59 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMPD3Q9NY59 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMPD3Q9NY59 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMPD3Q9NY59 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SMPD3Q9NY59 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMPD3Q9NY59 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.69■□□□□ 0.74
SMPD3Q9NY59 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD3Q9NY59 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD3Q9NY59 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.68■□□□□ 0.74
SMPD3Q9NY59 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD3Q9NY59 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD3Q9NY59 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD3Q9NY59 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD3Q9NY59 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD3Q9NY59 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SMPD3Q9NY59 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms