Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 pRNA.13-201ENST00000619112 90 ntBASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 Z98882.1-201ENST00000622160 2253 ntBASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 MIR3181-201ENST00000578512 73 ntBASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 AC005229.4-201ENST00000610085 2198 ntBASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIN7CQ9NUP9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 AL139246.5-201ENST00000606645 996 ntBASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 AL136162.1-201ENST00000607711 1078 ntBASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN7CQ9NUP9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 AC135279.3-201ENST00000610945 1311 ntBASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN7CQ9NUP9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
LIN7CQ9NUP9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 AC110285.6-201ENST00000617652 491 ntBASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.64■□□□□ 0.41
LIN7CQ9NUP9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIN7CQ9NUP9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LIN7CQ9NUP9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.63■□□□□ 0.41
LIN7CQ9NUP9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.63■□□□□ 0.41
LIN7CQ9NUP9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.63■□□□□ 0.41
LIN7CQ9NUP9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LIN7CQ9NUP9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIN7CQ9NUP9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.63■□□□□ 0.41
LIN7CQ9NUP9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.63■□□□□ 0.41
LIN7CQ9NUP9 AC104564.3-201ENST00000582367 638 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms