Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
VRTNQ9H8Y1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.82■■□□□ 1.24
VRTNQ9H8Y1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
VRTNQ9H8Y1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
VRTNQ9H8Y1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
VRTNQ9H8Y1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
VRTNQ9H8Y1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
VRTNQ9H8Y1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.81■■□□□ 1.24
VRTNQ9H8Y1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
VRTNQ9H8Y1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
VRTNQ9H8Y1 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.81■■□□□ 1.24
VRTNQ9H8Y1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
VRTNQ9H8Y1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.81■■□□□ 1.24
VRTNQ9H8Y1 KRT18P5-201ENST00000436075 1291 ntBASIC22.81■■□□□ 1.24
VRTNQ9H8Y1 AL162430.1-201ENST00000480705 870 ntBASIC22.81■■□□□ 1.24
VRTNQ9H8Y1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.81■■□□□ 1.24
VRTNQ9H8Y1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.81■■□□□ 1.24
VRTNQ9H8Y1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.81■■□□□ 1.24
VRTNQ9H8Y1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
VRTNQ9H8Y1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
VRTNQ9H8Y1 AC010542.4-201ENST00000563151 1910 ntBASIC22.8■■□□□ 1.24
VRTNQ9H8Y1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
VRTNQ9H8Y1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
VRTNQ9H8Y1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
VRTNQ9H8Y1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
VRTNQ9H8Y1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.8■■□□□ 1.24
VRTNQ9H8Y1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.8■■□□□ 1.24
VRTNQ9H8Y1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.8■■□□□ 1.24
VRTNQ9H8Y1 NTF6G-201ENST00000591094 616 ntBASIC22.8■■□□□ 1.24
VRTNQ9H8Y1 AC053503.5-201ENST00000601508 636 ntBASIC22.8■■□□□ 1.24
VRTNQ9H8Y1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
VRTNQ9H8Y1 AC004854.2-201ENST00000608450 1441 ntBASIC22.8■■□□□ 1.24
VRTNQ9H8Y1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.8■■□□□ 1.24
VRTNQ9H8Y1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.8■■□□□ 1.24
VRTNQ9H8Y1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
VRTNQ9H8Y1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.8■■□□□ 1.24
VRTNQ9H8Y1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
VRTNQ9H8Y1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.79■■□□□ 1.24
VRTNQ9H8Y1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.79■■□□□ 1.24
VRTNQ9H8Y1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
VRTNQ9H8Y1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.79■■□□□ 1.24
VRTNQ9H8Y1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.79■■□□□ 1.24
VRTNQ9H8Y1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.79■■□□□ 1.24
VRTNQ9H8Y1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
VRTNQ9H8Y1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
VRTNQ9H8Y1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
VRTNQ9H8Y1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
VRTNQ9H8Y1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
VRTNQ9H8Y1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
VRTNQ9H8Y1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
VRTNQ9H8Y1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.78■■□□□ 1.24
VRTNQ9H8Y1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
VRTNQ9H8Y1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.78■■□□□ 1.24
VRTNQ9H8Y1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
VRTNQ9H8Y1 AC079834.2-201ENST00000609776 1949 ntBASIC22.78■■□□□ 1.24
VRTNQ9H8Y1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
VRTNQ9H8Y1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
VRTNQ9H8Y1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
VRTNQ9H8Y1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
VRTNQ9H8Y1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
VRTNQ9H8Y1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.77■■□□□ 1.24
VRTNQ9H8Y1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.77■■□□□ 1.24
VRTNQ9H8Y1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.77■■□□□ 1.24
VRTNQ9H8Y1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
VRTNQ9H8Y1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
VRTNQ9H8Y1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
VRTNQ9H8Y1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
VRTNQ9H8Y1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.76■■□□□ 1.23
VRTNQ9H8Y1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
VRTNQ9H8Y1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.76■■□□□ 1.23
VRTNQ9H8Y1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.76■■□□□ 1.23
VRTNQ9H8Y1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.76■■□□□ 1.23
VRTNQ9H8Y1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.76■■□□□ 1.23
VRTNQ9H8Y1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
VRTNQ9H8Y1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.76■■□□□ 1.23
VRTNQ9H8Y1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.76■■□□□ 1.23
VRTNQ9H8Y1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.76■■□□□ 1.23
VRTNQ9H8Y1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
VRTNQ9H8Y1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.76■■□□□ 1.23
VRTNQ9H8Y1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
VRTNQ9H8Y1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
VRTNQ9H8Y1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
VRTNQ9H8Y1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
VRTNQ9H8Y1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
VRTNQ9H8Y1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
VRTNQ9H8Y1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
VRTNQ9H8Y1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
VRTNQ9H8Y1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
VRTNQ9H8Y1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.75■■□□□ 1.23
VRTNQ9H8Y1 AC138907.5-202ENST00000569484 235 ntBASIC22.75■■□□□ 1.23
VRTNQ9H8Y1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.75■■□□□ 1.23
VRTNQ9H8Y1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.75■■□□□ 1.23
VRTNQ9H8Y1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
VRTNQ9H8Y1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
VRTNQ9H8Y1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
VRTNQ9H8Y1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
VRTNQ9H8Y1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
VRTNQ9H8Y1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.75■■□□□ 1.23
VRTNQ9H8Y1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
VRTNQ9H8Y1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms