Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.41■■□□□ 1.02
VPS11Q9H270 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
VPS11Q9H270 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.41■■□□□ 1.02
VPS11Q9H270 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
VPS11Q9H270 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VPS11Q9H270 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VPS11Q9H270 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
VPS11Q9H270 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
VPS11Q9H270 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.41■■□□□ 1.02
VPS11Q9H270 AC026471.6-201ENST00000622954 1905 ntBASIC21.41■■□□□ 1.02
VPS11Q9H270 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VPS11Q9H270 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VPS11Q9H270 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
VPS11Q9H270 OR7E47P-201ENST00000546390 1422 ntBASIC21.4■■□□□ 1.02
VPS11Q9H270 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.4■■□□□ 1.02
VPS11Q9H270 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
VPS11Q9H270 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
VPS11Q9H270 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VPS11Q9H270 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VPS11Q9H270 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
VPS11Q9H270 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
VPS11Q9H270 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
VPS11Q9H270 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VPS11Q9H270 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
VPS11Q9H270 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
VPS11Q9H270 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.39■■□□□ 1.02
VPS11Q9H270 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.39■■□□□ 1.02
VPS11Q9H270 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
VPS11Q9H270 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
VPS11Q9H270 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
VPS11Q9H270 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
VPS11Q9H270 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VPS11Q9H270 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.39■■□□□ 1.01
VPS11Q9H270 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.39■■□□□ 1.01
VPS11Q9H270 AL356740.2-201ENST00000601559 647 ntBASIC21.39■■□□□ 1.01
VPS11Q9H270 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VPS11Q9H270 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.39■■□□□ 1.01
VPS11Q9H270 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.39■■□□□ 1.01
VPS11Q9H270 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VPS11Q9H270 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VPS11Q9H270 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
VPS11Q9H270 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.38■■□□□ 1.01
VPS11Q9H270 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
VPS11Q9H270 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
VPS11Q9H270 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
VPS11Q9H270 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
VPS11Q9H270 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
VPS11Q9H270 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
VPS11Q9H270 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VPS11Q9H270 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.38■■□□□ 1.01
VPS11Q9H270 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VPS11Q9H270 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VPS11Q9H270 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.37■■□□□ 1.01
VPS11Q9H270 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VPS11Q9H270 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VPS11Q9H270 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
VPS11Q9H270 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VPS11Q9H270 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VPS11Q9H270 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.37■■□□□ 1.01
VPS11Q9H270 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.37■■□□□ 1.01
VPS11Q9H270 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.37■■□□□ 1.01
VPS11Q9H270 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
VPS11Q9H270 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
VPS11Q9H270 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
VPS11Q9H270 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.37■■□□□ 1.01
VPS11Q9H270 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VPS11Q9H270 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.37■■□□□ 1.01
VPS11Q9H270 AL121603.2-201ENST00000557373 2117 ntBASIC21.37■■□□□ 1.01
VPS11Q9H270 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.36■■□□□ 1.01
VPS11Q9H270 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS11Q9H270 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.36■■□□□ 1.01
VPS11Q9H270 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS11Q9H270 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.36■■□□□ 1.01
VPS11Q9H270 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.36■■□□□ 1.01
VPS11Q9H270 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VPS11Q9H270 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS11Q9H270 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
VPS11Q9H270 MIR3181-201ENST00000578512 73 ntBASIC21.36■■□□□ 1.01
VPS11Q9H270 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS11Q9H270 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS11Q9H270 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS11Q9H270 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.36■■□□□ 1.01
VPS11Q9H270 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VPS11Q9H270 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS11Q9H270 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS11Q9H270 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
VPS11Q9H270 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS11Q9H270 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS11Q9H270 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
VPS11Q9H270 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VPS11Q9H270 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS11Q9H270 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
VPS11Q9H270 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS11Q9H270 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS11Q9H270 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS11Q9H270 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
VPS11Q9H270 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS11Q9H270 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS11Q9H270 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS11Q9H270 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms