Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.34■□□□□ 0.21
NDUFAF3Q9BU61 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NDUFAF3Q9BU61 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.33■□□□□ 0.21
NDUFAF3Q9BU61 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
NDUFAF3Q9BU61 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
NDUFAF3Q9BU61 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
NDUFAF3Q9BU61 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
NDUFAF3Q9BU61 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 ESRRAP2-201ENST00000418437 1549 ntBASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NDUFAF3Q9BU61 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 AL356740.2-201ENST00000601559 647 ntBASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFAF3Q9BU61 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFAF3Q9BU61 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NDUFAF3Q9BU61 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFAF3Q9BU61 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFAF3Q9BU61 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFAF3Q9BU61 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFAF3Q9BU61 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.3■□□□□ 0.2
NDUFAF3Q9BU61 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFAF3Q9BU61 AC019069.1-201ENST00000610008 1333 ntBASIC16.3■□□□□ 0.2
NDUFAF3Q9BU61 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFAF3Q9BU61 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFAF3Q9BU61 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFAF3Q9BU61 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFAF3Q9BU61 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFAF3Q9BU61 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NDUFAF3Q9BU61 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.3■□□□□ 0.2
NDUFAF3Q9BU61 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFAF3Q9BU61 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms