Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 EFS-203ENST00000429593 2610 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 DUSP8P5-201ENST00000422884 1815 ntBASIC14.78□□□□□ -0.04
UPK3BQ9BT76 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.78□□□□□ -0.04
UPK3BQ9BT76 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
UPK3BQ9BT76 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
UPK3BQ9BT76 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UPK3BQ9BT76 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
UPK3BQ9BT76 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK3BQ9BT76 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK3BQ9BT76 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UPK3BQ9BT76 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14.77□□□□□ -0.04
UPK3BQ9BT76 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK3BQ9BT76 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.77□□□□□ -0.04
UPK3BQ9BT76 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK3BQ9BT76 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK3BQ9BT76 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK3BQ9BT76 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
UPK3BQ9BT76 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
UPK3BQ9BT76 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.77□□□□□ -0.05
UPK3BQ9BT76 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.77□□□□□ -0.05
UPK3BQ9BT76 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
UPK3BQ9BT76 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
UPK3BQ9BT76 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
UPK3BQ9BT76 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC14.77□□□□□ -0.05
UPK3BQ9BT76 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
UPK3BQ9BT76 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UPK3BQ9BT76 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
UPK3BQ9BT76 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
UPK3BQ9BT76 AC005224.4-201ENST00000583262 1652 ntBASIC14.77□□□□□ -0.05
UPK3BQ9BT76 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UPK3BQ9BT76 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC14.77□□□□□ -0.05
UPK3BQ9BT76 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK3BQ9BT76 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK3BQ9BT76 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
UPK3BQ9BT76 OR7E47P-201ENST00000546390 1422 ntBASIC14.76□□□□□ -0.05
UPK3BQ9BT76 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK3BQ9BT76 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK3BQ9BT76 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK3BQ9BT76 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UPK3BQ9BT76 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
UPK3BQ9BT76 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK3BQ9BT76 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UPK3BQ9BT76 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC14.76□□□□□ -0.05
UPK3BQ9BT76 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC14.76□□□□□ -0.05
UPK3BQ9BT76 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK3BQ9BT76 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.76□□□□□ -0.05
UPK3BQ9BT76 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC14.76□□□□□ -0.05
UPK3BQ9BT76 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK3BQ9BT76 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK3BQ9BT76 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC14.75□□□□□ -0.05
UPK3BQ9BT76 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC14.75□□□□□ -0.05
UPK3BQ9BT76 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK3BQ9BT76 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.75□□□□□ -0.05
UPK3BQ9BT76 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.75□□□□□ -0.05
UPK3BQ9BT76 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK3BQ9BT76 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.75□□□□□ -0.05
UPK3BQ9BT76 AC022517.1-201ENST00000592429 346 ntBASIC14.75□□□□□ -0.05
UPK3BQ9BT76 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.75□□□□□ -0.05
UPK3BQ9BT76 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK3BQ9BT76 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC14.75□□□□□ -0.05
UPK3BQ9BT76 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.75□□□□□ -0.05
UPK3BQ9BT76 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UPK3BQ9BT76 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK3BQ9BT76 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK3BQ9BT76 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UPK3BQ9BT76 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UPK3BQ9BT76 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK3BQ9BT76 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK3BQ9BT76 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC14.74□□□□□ -0.05
UPK3BQ9BT76 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK3BQ9BT76 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK3BQ9BT76 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC14.74□□□□□ -0.05
UPK3BQ9BT76 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK3BQ9BT76 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.74□□□□□ -0.05
UPK3BQ9BT76 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
UPK3BQ9BT76 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.74□□□□□ -0.05
UPK3BQ9BT76 AC079140.4-201ENST00000507448 529 ntBASIC14.74□□□□□ -0.05
UPK3BQ9BT76 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.74□□□□□ -0.05
UPK3BQ9BT76 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.74□□□□□ -0.05
UPK3BQ9BT76 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.74□□□□□ -0.05
UPK3BQ9BT76 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK3BQ9BT76 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms