Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBA1CQ9BQE3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TUBA1CQ9BQE3 AL157384.1-201ENST00000445995 2473 ntBASIC20.04■□□□□ 0.8
TUBA1CQ9BQE3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBA1CQ9BQE3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBA1CQ9BQE3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBA1CQ9BQE3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
TUBA1CQ9BQE3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBA1CQ9BQE3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
TUBA1CQ9BQE3 AC105265.2-201ENST00000467189 838 ntBASIC20.04■□□□□ 0.8
TUBA1CQ9BQE3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TUBA1CQ9BQE3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TUBA1CQ9BQE3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TUBA1CQ9BQE3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBA1CQ9BQE3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TUBA1CQ9BQE3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBA1CQ9BQE3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 AC027682.1-201ENST00000562846 899 ntBASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 FP325331.1-202ENST00000623531 1380 ntBASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 AC007952.6-201ENST00000573168 2673 ntBASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 AC003957.1-201ENST00000625108 2673 ntBASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.03■□□□□ 0.8
TUBA1CQ9BQE3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBA1CQ9BQE3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TUBA1CQ9BQE3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBA1CQ9BQE3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBA1CQ9BQE3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBA1CQ9BQE3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBA1CQ9BQE3 CA15P2-201ENST00000611168 834 ntBASIC20.02■□□□□ 0.8
TUBA1CQ9BQE3 RASA4CP-201ENST00000424092 1398 ntBASIC20.02■□□□□ 0.8
TUBA1CQ9BQE3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBA1CQ9BQE3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBA1CQ9BQE3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBA1CQ9BQE3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TUBA1CQ9BQE3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TUBA1CQ9BQE3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TUBA1CQ9BQE3 AC144652.1-201ENST00000609974 1624 ntBASIC20.02■□□□□ 0.79
TUBA1CQ9BQE3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBA1CQ9BQE3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBA1CQ9BQE3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TUBA1CQ9BQE3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBA1CQ9BQE3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TUBA1CQ9BQE3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TUBA1CQ9BQE3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBA1CQ9BQE3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBA1CQ9BQE3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBA1CQ9BQE3 AC099791.1-201ENST00000416440 715 ntBASIC20.01■□□□□ 0.79
TUBA1CQ9BQE3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TUBA1CQ9BQE3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBA1CQ9BQE3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBA1CQ9BQE3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBA1CQ9BQE3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.01■□□□□ 0.79
TUBA1CQ9BQE3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBA1CQ9BQE3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20■□□□□ 0.79
TUBA1CQ9BQE3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20■□□□□ 0.79
TUBA1CQ9BQE3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBA1CQ9BQE3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20■□□□□ 0.79
TUBA1CQ9BQE3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20■□□□□ 0.79
TUBA1CQ9BQE3 DUX4L4-201ENST00000566884 1269 ntBASIC20■□□□□ 0.79
TUBA1CQ9BQE3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20■□□□□ 0.79
TUBA1CQ9BQE3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20■□□□□ 0.79
TUBA1CQ9BQE3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20■□□□□ 0.79
TUBA1CQ9BQE3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBA1CQ9BQE3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TUBA1CQ9BQE3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TUBA1CQ9BQE3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20■□□□□ 0.79
TUBA1CQ9BQE3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBA1CQ9BQE3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20■□□□□ 0.79
TUBA1CQ9BQE3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
TUBA1CQ9BQE3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
TUBA1CQ9BQE3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TUBA1CQ9BQE3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TUBA1CQ9BQE3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TUBA1CQ9BQE3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TUBA1CQ9BQE3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TUBA1CQ9BQE3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TUBA1CQ9BQE3 BX842568.3-201ENST00000418104 571 ntBASIC19.99■□□□□ 0.79
TUBA1CQ9BQE3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TUBA1CQ9BQE3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TUBA1CQ9BQE3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.99■□□□□ 0.79
TUBA1CQ9BQE3 AC233992.3-201ENST00000607491 485 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms