Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.93■□□□□ 0.62
USB1Q9BQ65 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
USB1Q9BQ65 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USB1Q9BQ65 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USB1Q9BQ65 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USB1Q9BQ65 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
USB1Q9BQ65 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
USB1Q9BQ65 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.92■□□□□ 0.62
USB1Q9BQ65 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
USB1Q9BQ65 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.92■□□□□ 0.62
USB1Q9BQ65 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.92■□□□□ 0.62
USB1Q9BQ65 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USB1Q9BQ65 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USB1Q9BQ65 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.92■□□□□ 0.62
USB1Q9BQ65 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.92■□□□□ 0.62
USB1Q9BQ65 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USB1Q9BQ65 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.92■□□□□ 0.62
USB1Q9BQ65 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.92■□□□□ 0.62
USB1Q9BQ65 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.92■□□□□ 0.62
USB1Q9BQ65 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USB1Q9BQ65 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USB1Q9BQ65 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.92■□□□□ 0.62
USB1Q9BQ65 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
USB1Q9BQ65 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USB1Q9BQ65 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USB1Q9BQ65 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USB1Q9BQ65 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.91■□□□□ 0.62
USB1Q9BQ65 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.91■□□□□ 0.62
USB1Q9BQ65 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USB1Q9BQ65 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USB1Q9BQ65 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.91■□□□□ 0.62
USB1Q9BQ65 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USB1Q9BQ65 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USB1Q9BQ65 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
USB1Q9BQ65 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USB1Q9BQ65 AC022517.1-201ENST00000592429 346 ntBASIC18.9■□□□□ 0.62
USB1Q9BQ65 AL137784.2-201ENST00000607332 1000 ntBASIC18.9■□□□□ 0.62
USB1Q9BQ65 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
USB1Q9BQ65 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USB1Q9BQ65 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USB1Q9BQ65 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.9■□□□□ 0.62
USB1Q9BQ65 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
USB1Q9BQ65 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.89■□□□□ 0.61
USB1Q9BQ65 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USB1Q9BQ65 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
USB1Q9BQ65 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
USB1Q9BQ65 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
USB1Q9BQ65 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.89■□□□□ 0.61
USB1Q9BQ65 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.89■□□□□ 0.61
USB1Q9BQ65 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.89■□□□□ 0.61
USB1Q9BQ65 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
USB1Q9BQ65 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USB1Q9BQ65 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USB1Q9BQ65 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USB1Q9BQ65 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USB1Q9BQ65 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USB1Q9BQ65 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.89■□□□□ 0.61
USB1Q9BQ65 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.88■□□□□ 0.61
USB1Q9BQ65 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
USB1Q9BQ65 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USB1Q9BQ65 KRT19P1-201ENST00000405746 1186 ntBASIC18.88■□□□□ 0.61
USB1Q9BQ65 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
USB1Q9BQ65 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USB1Q9BQ65 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.88■□□□□ 0.61
USB1Q9BQ65 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USB1Q9BQ65 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.88■□□□□ 0.61
USB1Q9BQ65 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USB1Q9BQ65 AC092667.1-201ENST00000434301 2586 ntBASIC18.88■□□□□ 0.61
USB1Q9BQ65 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USB1Q9BQ65 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
USB1Q9BQ65 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USB1Q9BQ65 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USB1Q9BQ65 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
USB1Q9BQ65 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USB1Q9BQ65 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USB1Q9BQ65 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
USB1Q9BQ65 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USB1Q9BQ65 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USB1Q9BQ65 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
USB1Q9BQ65 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.87■□□□□ 0.61
USB1Q9BQ65 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USB1Q9BQ65 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USB1Q9BQ65 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USB1Q9BQ65 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USB1Q9BQ65 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.87■□□□□ 0.61
USB1Q9BQ65 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.87■□□□□ 0.61
USB1Q9BQ65 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.87■□□□□ 0.61
USB1Q9BQ65 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USB1Q9BQ65 AF106564.1-201ENST00000607058 2553 ntBASIC18.87■□□□□ 0.61
USB1Q9BQ65 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.86■□□□□ 0.61
USB1Q9BQ65 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USB1Q9BQ65 OR7E47P-201ENST00000546390 1422 ntBASIC18.86■□□□□ 0.61
USB1Q9BQ65 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.86■□□□□ 0.61
USB1Q9BQ65 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USB1Q9BQ65 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USB1Q9BQ65 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.86■□□□□ 0.61
USB1Q9BQ65 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
USB1Q9BQ65 AC079140.4-201ENST00000507448 529 ntBASIC18.86■□□□□ 0.61
USB1Q9BQ65 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
USB1Q9BQ65 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms