Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TIMP4Q99727 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.59■□□□□ 0.73
TIMP4Q99727 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TIMP4Q99727 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TIMP4Q99727 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TIMP4Q99727 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.59■□□□□ 0.73
TIMP4Q99727 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TIMP4Q99727 BX005040.4-201ENST00000637145 1518 ntBASIC19.59■□□□□ 0.73
TIMP4Q99727 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.59■□□□□ 0.73
TIMP4Q99727 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TIMP4Q99727 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TIMP4Q99727 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TIMP4Q99727 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.58■□□□□ 0.73
TIMP4Q99727 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TIMP4Q99727 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TIMP4Q99727 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
TIMP4Q99727 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TIMP4Q99727 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
TIMP4Q99727 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TIMP4Q99727 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TIMP4Q99727 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TIMP4Q99727 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.58■□□□□ 0.72
TIMP4Q99727 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TIMP4Q99727 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TIMP4Q99727 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.58■□□□□ 0.72
TIMP4Q99727 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.58■□□□□ 0.72
TIMP4Q99727 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.58■□□□□ 0.72
TIMP4Q99727 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TIMP4Q99727 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP4Q99727 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP4Q99727 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP4Q99727 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP4Q99727 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP4Q99727 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP4Q99727 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.57■□□□□ 0.72
TIMP4Q99727 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP4Q99727 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TIMP4Q99727 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP4Q99727 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.57■□□□□ 0.72
TIMP4Q99727 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP4Q99727 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TIMP4Q99727 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP4Q99727 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.57■□□□□ 0.72
TIMP4Q99727 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP4Q99727 AC022517.1-201ENST00000592429 346 ntBASIC19.57■□□□□ 0.72
TIMP4Q99727 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.57■□□□□ 0.72
TIMP4Q99727 TPRG1LP1-201ENST00000598702 760 ntBASIC19.57■□□□□ 0.72
TIMP4Q99727 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.57■□□□□ 0.72
TIMP4Q99727 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.57■□□□□ 0.72
TIMP4Q99727 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.57■□□□□ 0.72
TIMP4Q99727 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP4Q99727 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP4Q99727 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP4Q99727 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP4Q99727 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TIMP4Q99727 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP4Q99727 AC010542.4-201ENST00000563151 1910 ntBASIC19.57■□□□□ 0.72
TIMP4Q99727 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TIMP4Q99727 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.56■□□□□ 0.72
TIMP4Q99727 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TIMP4Q99727 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TIMP4Q99727 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TIMP4Q99727 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TIMP4Q99727 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TIMP4Q99727 NTF6G-201ENST00000591094 616 ntBASIC19.56■□□□□ 0.72
TIMP4Q99727 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TIMP4Q99727 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TIMP4Q99727 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.56■□□□□ 0.72
TIMP4Q99727 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TIMP4Q99727 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TIMP4Q99727 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TIMP4Q99727 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.55■□□□□ 0.72
TIMP4Q99727 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TIMP4Q99727 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TIMP4Q99727 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TIMP4Q99727 LINC01960-201ENST00000563759 1884 ntBASIC19.55■□□□□ 0.72
TIMP4Q99727 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.55■□□□□ 0.72
TIMP4Q99727 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TIMP4Q99727 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TIMP4Q99727 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TIMP4Q99727 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TIMP4Q99727 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TIMP4Q99727 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.54■□□□□ 0.72
TIMP4Q99727 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TIMP4Q99727 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TIMP4Q99727 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.54■□□□□ 0.72
TIMP4Q99727 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TIMP4Q99727 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TIMP4Q99727 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TIMP4Q99727 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.54■□□□□ 0.72
TIMP4Q99727 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.54■□□□□ 0.72
TIMP4Q99727 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TIMP4Q99727 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.54■□□□□ 0.72
TIMP4Q99727 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TIMP4Q99727 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
TIMP4Q99727 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TIMP4Q99727 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TIMP4Q99727 FAM99A-202ENST00000538190 1989 ntBASIC19.53■□□□□ 0.72
TIMP4Q99727 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TIMP4Q99727 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms