Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC30.91■■■□□ 2.54
SCAF11Q99590 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SCAF11Q99590 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
SCAF11Q99590 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
SCAF11Q99590 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SCAF11Q99590 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC30.9■■■□□ 2.54
SCAF11Q99590 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
SCAF11Q99590 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC30.9■■■□□ 2.54
SCAF11Q99590 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
SCAF11Q99590 BX276092.2-201ENST00000417668 665 ntBASIC30.9■■■□□ 2.54
SCAF11Q99590 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC30.9■■■□□ 2.54
SCAF11Q99590 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
SCAF11Q99590 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
SCAF11Q99590 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC30.9■■■□□ 2.54
SCAF11Q99590 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC30.9■■■□□ 2.54
SCAF11Q99590 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SCAF11Q99590 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
SCAF11Q99590 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
SCAF11Q99590 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC30.89■■■□□ 2.54
SCAF11Q99590 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC30.89■■■□□ 2.54
SCAF11Q99590 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC30.89■■■□□ 2.54
SCAF11Q99590 AC142381.4-202ENST00000563973 229 ntBASIC30.89■■■□□ 2.54
SCAF11Q99590 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
SCAF11Q99590 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
SCAF11Q99590 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.53
SCAF11Q99590 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.53
SCAF11Q99590 NAA20-201ENST00000310450 920 ntTSL 2 BASIC30.89■■■□□ 2.53
SCAF11Q99590 AC128676.1-201ENST00000454392 318 ntBASIC30.89■■■□□ 2.53
SCAF11Q99590 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
SCAF11Q99590 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC30.89■■■□□ 2.53
SCAF11Q99590 AC069236.1-201ENST00000604339 616 ntBASIC30.89■■■□□ 2.53
SCAF11Q99590 MMD2-204ENST00000612910 778 ntTSL 5 BASIC30.89■■■□□ 2.53
SCAF11Q99590 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SCAF11Q99590 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
SCAF11Q99590 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SCAF11Q99590 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SCAF11Q99590 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
SCAF11Q99590 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC30.88■■■□□ 2.53
SCAF11Q99590 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC30.88■■■□□ 2.53
SCAF11Q99590 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC30.88■■■□□ 2.53
SCAF11Q99590 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
SCAF11Q99590 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC30.87■■■□□ 2.53
SCAF11Q99590 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
SCAF11Q99590 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SCAF11Q99590 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC30.87■■■□□ 2.53
SCAF11Q99590 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SCAF11Q99590 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SCAF11Q99590 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC30.87■■■□□ 2.53
SCAF11Q99590 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53
SCAF11Q99590 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC30.87■■■□□ 2.53
SCAF11Q99590 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC30.87■■■□□ 2.53
SCAF11Q99590 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC30.86■■■□□ 2.53
SCAF11Q99590 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC30.86■■■□□ 2.53
SCAF11Q99590 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
SCAF11Q99590 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
SCAF11Q99590 FXN-202ENST00000396364 980 ntTSL 5 BASIC30.86■■■□□ 2.53
SCAF11Q99590 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC30.86■■■□□ 2.53
SCAF11Q99590 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SCAF11Q99590 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC30.86■■■□□ 2.53
SCAF11Q99590 UNC93B4-201ENST00000505679 747 ntBASIC30.86■■■□□ 2.53
SCAF11Q99590 MMAB-206ENST00000540016 945 ntTSL 3 BASIC30.86■■■□□ 2.53
SCAF11Q99590 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
SCAF11Q99590 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC30.85■■■□□ 2.53
SCAF11Q99590 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC30.85■■■□□ 2.53
SCAF11Q99590 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC30.85■■■□□ 2.53
SCAF11Q99590 AC091874.3-201ENST00000512672 1195 ntBASIC30.85■■■□□ 2.53
SCAF11Q99590 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC30.85■■■□□ 2.53
SCAF11Q99590 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC30.85■■■□□ 2.53
SCAF11Q99590 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC30.85■■■□□ 2.53
SCAF11Q99590 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SCAF11Q99590 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC30.85■■■□□ 2.53
SCAF11Q99590 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC30.84■■■□□ 2.53
SCAF11Q99590 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SCAF11Q99590 EEF1DP3-203ENST00000566025 782 ntBASIC30.84■■■□□ 2.53
SCAF11Q99590 USP36-216ENST00000589424 970 ntTSL 5 BASIC30.84■■■□□ 2.53
SCAF11Q99590 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC30.84■■■□□ 2.53
SCAF11Q99590 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC30.83■■■□□ 2.53
SCAF11Q99590 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC30.83■■■□□ 2.53
SCAF11Q99590 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC30.83■■■□□ 2.53
SCAF11Q99590 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SCAF11Q99590 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC30.83■■■□□ 2.53
SCAF11Q99590 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC30.83■■■□□ 2.53
SCAF11Q99590 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SCAF11Q99590 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC30.83■■■□□ 2.53
SCAF11Q99590 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SCAF11Q99590 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC30.83■■■□□ 2.53
SCAF11Q99590 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SCAF11Q99590 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SCAF11Q99590 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SCAF11Q99590 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SCAF11Q99590 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC30.82■■■□□ 2.53
SCAF11Q99590 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC30.82■■■□□ 2.53
SCAF11Q99590 AC097658.1-201ENST00000475555 843 ntBASIC30.82■■■□□ 2.53
SCAF11Q99590 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC30.82■■■□□ 2.53
SCAF11Q99590 AC008694.1-202ENST00000636953 945 ntBASIC30.82■■■□□ 2.53
SCAF11Q99590 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SCAF11Q99590 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC30.82■■■□□ 2.52
SCAF11Q99590 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
SCAF11Q99590 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC30.82■■■□□ 2.52
SCAF11Q99590 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms