Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MUC4Q99102 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.56■□□□□ 0.08
MUC4Q99102 AL157384.1-201ENST00000445995 2473 ntBASIC15.56■□□□□ 0.08
MUC4Q99102 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MUC4Q99102 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
MUC4Q99102 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
MUC4Q99102 pRNA.6-201ENST00000610482 90 ntBASIC15.56■□□□□ 0.08
MUC4Q99102 pRNA.5-201ENST00000612139 90 ntBASIC15.56■□□□□ 0.08
MUC4Q99102 pRNA.11-201ENST00000618423 90 ntBASIC15.56■□□□□ 0.08
MUC4Q99102 pRNA.13-201ENST00000619112 90 ntBASIC15.56■□□□□ 0.08
MUC4Q99102 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MUC4Q99102 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MUC4Q99102 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MUC4Q99102 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
MUC4Q99102 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
MUC4Q99102 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
MUC4Q99102 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
MUC4Q99102 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
MUC4Q99102 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MUC4Q99102 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MUC4Q99102 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MUC4Q99102 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.55■□□□□ 0.08
MUC4Q99102 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MUC4Q99102 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
MUC4Q99102 SRD5A1P1-201ENST00000442297 786 ntBASIC15.55■□□□□ 0.08
MUC4Q99102 MIR3181-201ENST00000578512 73 ntBASIC15.55■□□□□ 0.08
MUC4Q99102 AC087239.1-201ENST00000622671 572 ntBASIC15.55■□□□□ 0.08
MUC4Q99102 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MUC4Q99102 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MUC4Q99102 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MUC4Q99102 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MUC4Q99102 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MUC4Q99102 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
MUC4Q99102 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MUC4Q99102 SLC47A1P1-202ENST00000449666 945 ntBASIC15.55■□□□□ 0.08
MUC4Q99102 AL162430.1-201ENST00000480705 870 ntBASIC15.55■□□□□ 0.08
MUC4Q99102 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
MUC4Q99102 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.54■□□□□ 0.08
MUC4Q99102 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.54■□□□□ 0.08
MUC4Q99102 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
MUC4Q99102 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
MUC4Q99102 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MUC4Q99102 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
MUC4Q99102 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MUC4Q99102 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC15.54■□□□□ 0.08
MUC4Q99102 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC15.54■□□□□ 0.08
MUC4Q99102 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.54■□□□□ 0.08
MUC4Q99102 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MUC4Q99102 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MUC4Q99102 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MUC4Q99102 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MUC4Q99102 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
MUC4Q99102 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MUC4Q99102 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MUC4Q99102 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MUC4Q99102 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
MUC4Q99102 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.54■□□□□ 0.08
MUC4Q99102 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MUC4Q99102 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.53■□□□□ 0.08
MUC4Q99102 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC15.53■□□□□ 0.08
MUC4Q99102 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.53■□□□□ 0.08
MUC4Q99102 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MUC4Q99102 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.53■□□□□ 0.08
MUC4Q99102 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.53■□□□□ 0.08
MUC4Q99102 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MUC4Q99102 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MUC4Q99102 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MUC4Q99102 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
MUC4Q99102 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.53■□□□□ 0.08
MUC4Q99102 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.53■□□□□ 0.08
MUC4Q99102 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MUC4Q99102 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
MUC4Q99102 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.53■□□□□ 0.08
MUC4Q99102 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
MUC4Q99102 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MUC4Q99102 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
MUC4Q99102 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
MUC4Q99102 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MUC4Q99102 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MUC4Q99102 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC15.52■□□□□ 0.08
MUC4Q99102 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
MUC4Q99102 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.52■□□□□ 0.08
MUC4Q99102 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
MUC4Q99102 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MUC4Q99102 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MUC4Q99102 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
MUC4Q99102 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MUC4Q99102 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MUC4Q99102 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MUC4Q99102 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.52■□□□□ 0.07
MUC4Q99102 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MUC4Q99102 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.52■□□□□ 0.07
MUC4Q99102 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.52■□□□□ 0.07
MUC4Q99102 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
MUC4Q99102 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
MUC4Q99102 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.51■□□□□ 0.07
MUC4Q99102 AC068587.7-201ENST00000641602 218 ntBASIC15.51■□□□□ 0.07
MUC4Q99102 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MUC4Q99102 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.51■□□□□ 0.07
MUC4Q99102 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms