Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB18PQ96TA0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB18PQ96TA0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB18PQ96TA0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB18PQ96TA0 AF106564.1-201ENST00000607058 2553 ntBASIC22.68■■□□□ 1.22
PCDHB18PQ96TA0 AP006587.3-201ENST00000525742 1516 ntBASIC22.68■■□□□ 1.22
PCDHB18PQ96TA0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB18PQ96TA0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.68■■□□□ 1.22
PCDHB18PQ96TA0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB18PQ96TA0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB18PQ96TA0 AC104564.3-201ENST00000582367 638 ntBASIC22.68■■□□□ 1.22
PCDHB18PQ96TA0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.68■■□□□ 1.22
PCDHB18PQ96TA0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.68■■□□□ 1.22
PCDHB18PQ96TA0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
PCDHB18PQ96TA0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB18PQ96TA0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHB18PQ96TA0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB18PQ96TA0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB18PQ96TA0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB18PQ96TA0 FEM1AP4-201ENST00000443167 1987 ntBASIC22.67■■□□□ 1.22
PCDHB18PQ96TA0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHB18PQ96TA0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.67■■□□□ 1.22
PCDHB18PQ96TA0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB18PQ96TA0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.67■■□□□ 1.22
PCDHB18PQ96TA0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHB18PQ96TA0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB18PQ96TA0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB18PQ96TA0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB18PQ96TA0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB18PQ96TA0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.66■■□□□ 1.22
PCDHB18PQ96TA0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.66■■□□□ 1.22
PCDHB18PQ96TA0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PCDHB18PQ96TA0 SUDS3P1-201ENST00000505831 966 ntBASIC22.66■■□□□ 1.22
PCDHB18PQ96TA0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHB18PQ96TA0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDHB18PQ96TA0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB18PQ96TA0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB18PQ96TA0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDHB18PQ96TA0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB18PQ96TA0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB18PQ96TA0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB18PQ96TA0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.66■■□□□ 1.22
PCDHB18PQ96TA0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDHB18PQ96TA0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB18PQ96TA0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB18PQ96TA0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
PCDHB18PQ96TA0 RASA4CP-201ENST00000424092 1398 ntBASIC22.65■■□□□ 1.22
PCDHB18PQ96TA0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB18PQ96TA0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB18PQ96TA0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.65■■□□□ 1.22
PCDHB18PQ96TA0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.65■■□□□ 1.22
PCDHB18PQ96TA0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB18PQ96TA0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB18PQ96TA0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHB18PQ96TA0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB18PQ96TA0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB18PQ96TA0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
PCDHB18PQ96TA0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHB18PQ96TA0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.64■■□□□ 1.22
PCDHB18PQ96TA0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.64■■□□□ 1.22
PCDHB18PQ96TA0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHB18PQ96TA0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
PCDHB18PQ96TA0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.22
PCDHB18PQ96TA0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHB18PQ96TA0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB18PQ96TA0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB18PQ96TA0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
PCDHB18PQ96TA0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.64■■□□□ 1.21
PCDHB18PQ96TA0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB18PQ96TA0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.64■■□□□ 1.21
PCDHB18PQ96TA0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB18PQ96TA0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB18PQ96TA0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB18PQ96TA0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB18PQ96TA0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDHB18PQ96TA0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB18PQ96TA0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDHB18PQ96TA0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB18PQ96TA0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB18PQ96TA0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.63■■□□□ 1.21
PCDHB18PQ96TA0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB18PQ96TA0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDHB18PQ96TA0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDHB18PQ96TA0 AL139246.5-201ENST00000606645 996 ntBASIC22.63■■□□□ 1.21
PCDHB18PQ96TA0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDHB18PQ96TA0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDHB18PQ96TA0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDHB18PQ96TA0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB18PQ96TA0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB18PQ96TA0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB18PQ96TA0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB18PQ96TA0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB18PQ96TA0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB18PQ96TA0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDHB18PQ96TA0 AC105233.4-201ENST00000642045 216 ntBASIC22.62■■□□□ 1.21
PCDHB18PQ96TA0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB18PQ96TA0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDHB18PQ96TA0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDHB18PQ96TA0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB18PQ96TA0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms