Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.91■□□□□ 0.94
PDLIM5Q96HC4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.91■□□□□ 0.94
PDLIM5Q96HC4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.91■□□□□ 0.94
PDLIM5Q96HC4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.91■□□□□ 0.94
PDLIM5Q96HC4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDLIM5Q96HC4 AC105233.4-201ENST00000642045 216 ntBASIC20.91■□□□□ 0.94
PDLIM5Q96HC4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDLIM5Q96HC4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM5Q96HC4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM5Q96HC4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.9■□□□□ 0.94
PDLIM5Q96HC4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
PDLIM5Q96HC4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM5Q96HC4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.9■□□□□ 0.94
PDLIM5Q96HC4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM5Q96HC4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PDLIM5Q96HC4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.9■□□□□ 0.94
PDLIM5Q96HC4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.9■□□□□ 0.94
PDLIM5Q96HC4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM5Q96HC4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM5Q96HC4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM5Q96HC4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.9■□□□□ 0.94
PDLIM5Q96HC4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDLIM5Q96HC4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.89■□□□□ 0.94
PDLIM5Q96HC4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.89■□□□□ 0.94
PDLIM5Q96HC4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDLIM5Q96HC4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDLIM5Q96HC4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.89■□□□□ 0.93
PDLIM5Q96HC4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.89■□□□□ 0.93
PDLIM5Q96HC4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDLIM5Q96HC4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PDLIM5Q96HC4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.89■□□□□ 0.93
PDLIM5Q96HC4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDLIM5Q96HC4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
PDLIM5Q96HC4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDLIM5Q96HC4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDLIM5Q96HC4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDLIM5Q96HC4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDLIM5Q96HC4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.88■□□□□ 0.93
PDLIM5Q96HC4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PDLIM5Q96HC4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDLIM5Q96HC4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.88■□□□□ 0.93
PDLIM5Q96HC4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
PDLIM5Q96HC4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDLIM5Q96HC4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.88■□□□□ 0.93
PDLIM5Q96HC4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDLIM5Q96HC4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.87■□□□□ 0.93
PDLIM5Q96HC4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDLIM5Q96HC4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.87■□□□□ 0.93
PDLIM5Q96HC4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDLIM5Q96HC4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PDLIM5Q96HC4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDLIM5Q96HC4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDLIM5Q96HC4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.87■□□□□ 0.93
PDLIM5Q96HC4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM5Q96HC4 AC055733.4-201ENST00000638462 1354 ntBASIC20.86■□□□□ 0.93
PDLIM5Q96HC4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM5Q96HC4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
PDLIM5Q96HC4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.86■□□□□ 0.93
PDLIM5Q96HC4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.86■□□□□ 0.93
PDLIM5Q96HC4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM5Q96HC4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.86■□□□□ 0.93
PDLIM5Q96HC4 BX005040.4-201ENST00000637145 1518 ntBASIC20.86■□□□□ 0.93
PDLIM5Q96HC4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM5Q96HC4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.86■□□□□ 0.93
PDLIM5Q96HC4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM5Q96HC4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.86■□□□□ 0.93
PDLIM5Q96HC4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PDLIM5Q96HC4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM5Q96HC4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM5Q96HC4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PDLIM5Q96HC4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM5Q96HC4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.85■□□□□ 0.93
PDLIM5Q96HC4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PDLIM5Q96HC4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
PDLIM5Q96HC4 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.85■□□□□ 0.93
PDLIM5Q96HC4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.85■□□□□ 0.93
PDLIM5Q96HC4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM5Q96HC4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM5Q96HC4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM5Q96HC4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM5Q96HC4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PDLIM5Q96HC4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM5Q96HC4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
PDLIM5Q96HC4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
PDLIM5Q96HC4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.84■□□□□ 0.93
PDLIM5Q96HC4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM5Q96HC4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PDLIM5Q96HC4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PDLIM5Q96HC4 AC012414.1-201ENST00000556676 535 ntBASIC20.84■□□□□ 0.93
PDLIM5Q96HC4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM5Q96HC4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM5Q96HC4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PDLIM5Q96HC4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM5Q96HC4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.84■□□□□ 0.93
PDLIM5Q96HC4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PDLIM5Q96HC4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.84■□□□□ 0.93
PDLIM5Q96HC4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDLIM5Q96HC4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDLIM5Q96HC4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDLIM5Q96HC4 AC005224.4-201ENST00000583262 1652 ntBASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms