Protein–RNA interactions for Protein: Q96GD3

SCMH1, Polycomb protein SCMH1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1Q96GD3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCMH1Q96GD3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCMH1Q96GD3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCMH1Q96GD3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCMH1Q96GD3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SCMH1Q96GD3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCMH1Q96GD3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCMH1Q96GD3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCMH1Q96GD3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCMH1Q96GD3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCMH1Q96GD3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCMH1Q96GD3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCMH1Q96GD3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCMH1Q96GD3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCMH1Q96GD3 AC079089.2-201ENST00000531211 1277 ntBASIC19.74■□□□□ 0.75
SCMH1Q96GD3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCMH1Q96GD3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCMH1Q96GD3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.74■□□□□ 0.75
SCMH1Q96GD3 GUSBP5-202ENST00000510805 1989 ntBASIC19.74■□□□□ 0.75
SCMH1Q96GD3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCMH1Q96GD3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCMH1Q96GD3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SCMH1Q96GD3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.73■□□□□ 0.75
SCMH1Q96GD3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.73■□□□□ 0.75
SCMH1Q96GD3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.73■□□□□ 0.75
SCMH1Q96GD3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCMH1Q96GD3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.73■□□□□ 0.75
SCMH1Q96GD3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.73■□□□□ 0.75
SCMH1Q96GD3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.73■□□□□ 0.75
SCMH1Q96GD3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SCMH1Q96GD3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCMH1Q96GD3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCMH1Q96GD3 ECEL1P1-201ENST00000373592 1742 ntBASIC19.73■□□□□ 0.75
SCMH1Q96GD3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCMH1Q96GD3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCMH1Q96GD3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCMH1Q96GD3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
SCMH1Q96GD3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCMH1Q96GD3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCMH1Q96GD3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCMH1Q96GD3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.72■□□□□ 0.75
SCMH1Q96GD3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.72■□□□□ 0.75
SCMH1Q96GD3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCMH1Q96GD3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
SCMH1Q96GD3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SCMH1Q96GD3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCMH1Q96GD3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCMH1Q96GD3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.72■□□□□ 0.75
SCMH1Q96GD3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCMH1Q96GD3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCMH1Q96GD3 ID1-201ENST00000376105 1233 ntBASIC19.71■□□□□ 0.75
SCMH1Q96GD3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.71■□□□□ 0.75
SCMH1Q96GD3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.71■□□□□ 0.75
SCMH1Q96GD3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.71■□□□□ 0.75
SCMH1Q96GD3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCMH1Q96GD3 RAP2CP1-201ENST00000605103 478 ntBASIC19.71■□□□□ 0.75
SCMH1Q96GD3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCMH1Q96GD3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCMH1Q96GD3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCMH1Q96GD3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCMH1Q96GD3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.71■□□□□ 0.75
SCMH1Q96GD3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCMH1Q96GD3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.7■□□□□ 0.74
SCMH1Q96GD3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.7■□□□□ 0.74
SCMH1Q96GD3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCMH1Q96GD3 KRT18P11-201ENST00000435214 1283 ntBASIC19.7■□□□□ 0.74
SCMH1Q96GD3 CDCA4P2-201ENST00000441182 718 ntBASIC19.7■□□□□ 0.74
SCMH1Q96GD3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.7■□□□□ 0.74
SCMH1Q96GD3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.7■□□□□ 0.74
SCMH1Q96GD3 BID-214ENST00000617586 542 ntTSL 5 BASIC19.7■□□□□ 0.74
SCMH1Q96GD3 AC073111.5-205ENST00000641717 521 ntBASIC19.7■□□□□ 0.74
SCMH1Q96GD3 KRT87P-202ENST00000534226 1464 ntBASIC19.7■□□□□ 0.74
SCMH1Q96GD3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCMH1Q96GD3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCMH1Q96GD3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCMH1Q96GD3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCMH1Q96GD3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCMH1Q96GD3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCMH1Q96GD3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCMH1Q96GD3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCMH1Q96GD3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SCMH1Q96GD3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SCMH1Q96GD3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.69■□□□□ 0.74
SCMH1Q96GD3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCMH1Q96GD3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.69■□□□□ 0.74
SCMH1Q96GD3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCMH1Q96GD3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SCMH1Q96GD3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SCMH1Q96GD3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SCMH1Q96GD3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCMH1Q96GD3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCMH1Q96GD3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCMH1Q96GD3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCMH1Q96GD3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SCMH1Q96GD3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.68■□□□□ 0.74
SCMH1Q96GD3 ESRRAP2-201ENST00000418437 1549 ntBASIC19.68■□□□□ 0.74
SCMH1Q96GD3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.68■□□□□ 0.74
SCMH1Q96GD3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCMH1Q96GD3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCMH1Q96GD3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms