Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SIPA1Q96FS4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SIPA1Q96FS4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIPA1Q96FS4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIPA1Q96FS4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.42■■□□□ 1.02
SIPA1Q96FS4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
SIPA1Q96FS4 GUSBP6-202ENST00000438529 1198 ntBASIC21.42■■□□□ 1.02
SIPA1Q96FS4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SIPA1Q96FS4 AF201337.1-201ENST00000520239 748 ntBASIC21.42■■□□□ 1.02
SIPA1Q96FS4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.42■■□□□ 1.02
SIPA1Q96FS4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
SIPA1Q96FS4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.42■■□□□ 1.02
SIPA1Q96FS4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.42■■□□□ 1.02
SIPA1Q96FS4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SIPA1Q96FS4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SIPA1Q96FS4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SIPA1Q96FS4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SIPA1Q96FS4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.4■■□□□ 1.02
SIPA1Q96FS4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.4■■□□□ 1.02
SIPA1Q96FS4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
SIPA1Q96FS4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SIPA1Q96FS4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.4■■□□□ 1.02
SIPA1Q96FS4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SIPA1Q96FS4 TERF1P5-201ENST00000477545 1207 ntBASIC21.4■■□□□ 1.02
SIPA1Q96FS4 CD99P1-205ENST00000527459 561 ntBASIC21.4■■□□□ 1.02
SIPA1Q96FS4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.4■■□□□ 1.02
SIPA1Q96FS4 AC105036.2-201ENST00000569468 176 ntBASIC21.4■■□□□ 1.02
SIPA1Q96FS4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.4■■□□□ 1.02
SIPA1Q96FS4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.4■■□□□ 1.02
SIPA1Q96FS4 AC013268.1-206ENST00000638368 961 ntBASIC21.4■■□□□ 1.02
SIPA1Q96FS4 AC112229.1-201ENST00000639295 961 ntBASIC21.4■■□□□ 1.02
SIPA1Q96FS4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SIPA1Q96FS4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.4■■□□□ 1.02
SIPA1Q96FS4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SIPA1Q96FS4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SIPA1Q96FS4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SIPA1Q96FS4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SIPA1Q96FS4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.4■■□□□ 1.02
SIPA1Q96FS4 AC093323.1-202ENST00000635031 2045 ntBASIC21.39■■□□□ 1.02
SIPA1Q96FS4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
SIPA1Q96FS4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SIPA1Q96FS4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SIPA1Q96FS4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
SIPA1Q96FS4 ABHD17AP1-201ENST00000358206 933 ntBASIC21.39■■□□□ 1.01
SIPA1Q96FS4 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.39■■□□□ 1.01
SIPA1Q96FS4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SIPA1Q96FS4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.39■■□□□ 1.01
SIPA1Q96FS4 AL138781.1-201ENST00000566567 1274 ntBASIC21.39■■□□□ 1.01
SIPA1Q96FS4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.39■■□□□ 1.01
SIPA1Q96FS4 AC133552.2-202ENST00000575694 574 ntBASIC21.39■■□□□ 1.01
SIPA1Q96FS4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.39■■□□□ 1.01
SIPA1Q96FS4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SIPA1Q96FS4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.39■■□□□ 1.01
SIPA1Q96FS4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
SIPA1Q96FS4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
SIPA1Q96FS4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.39■■□□□ 1.01
SIPA1Q96FS4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SIPA1Q96FS4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.39■■□□□ 1.01
SIPA1Q96FS4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SIPA1Q96FS4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SIPA1Q96FS4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SIPA1Q96FS4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SIPA1Q96FS4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.38■■□□□ 1.01
SIPA1Q96FS4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.38■■□□□ 1.01
SIPA1Q96FS4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SIPA1Q96FS4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.38■■□□□ 1.01
SIPA1Q96FS4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SIPA1Q96FS4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SIPA1Q96FS4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.38■■□□□ 1.01
SIPA1Q96FS4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SIPA1Q96FS4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.38■■□□□ 1.01
SIPA1Q96FS4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SIPA1Q96FS4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
SIPA1Q96FS4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.38■■□□□ 1.01
SIPA1Q96FS4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
SIPA1Q96FS4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SIPA1Q96FS4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.37■■□□□ 1.01
SIPA1Q96FS4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SIPA1Q96FS4 AC008175.2-201ENST00000612840 297 ntBASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms