Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
SLC47A1Q96FL8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC47A1Q96FL8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC47A1Q96FL8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC47A1Q96FL8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SLC47A1Q96FL8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC47A1Q96FL8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.06■□□□□ 0.8
SLC47A1Q96FL8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC47A1Q96FL8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SLC47A1Q96FL8 AC104564.3-201ENST00000582367 638 ntBASIC20.06■□□□□ 0.8
SLC47A1Q96FL8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC47A1Q96FL8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC47A1Q96FL8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SLC47A1Q96FL8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC47A1Q96FL8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC47A1Q96FL8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
SLC47A1Q96FL8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC47A1Q96FL8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC47A1Q96FL8 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.05■□□□□ 0.8
SLC47A1Q96FL8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
SLC47A1Q96FL8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC47A1Q96FL8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
SLC47A1Q96FL8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SLC47A1Q96FL8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC47A1Q96FL8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC47A1Q96FL8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC47A1Q96FL8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SLC47A1Q96FL8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SLC47A1Q96FL8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC47A1Q96FL8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC47A1Q96FL8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC47A1Q96FL8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC47A1Q96FL8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC47A1Q96FL8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC47A1Q96FL8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC47A1Q96FL8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC47A1Q96FL8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC47A1Q96FL8 AL499627.2-201ENST00000606283 725 ntBASIC20.04■□□□□ 0.8
SLC47A1Q96FL8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC47A1Q96FL8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SLC47A1Q96FL8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC47A1Q96FL8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.04■□□□□ 0.8
SLC47A1Q96FL8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SLC47A1Q96FL8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC47A1Q96FL8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC47A1Q96FL8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SLC47A1Q96FL8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC47A1Q96FL8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC47A1Q96FL8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SLC47A1Q96FL8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC47A1Q96FL8 MIR3621-201ENST00000580529 85 ntBASIC20.03■□□□□ 0.8
SLC47A1Q96FL8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC47A1Q96FL8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC47A1Q96FL8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC47A1Q96FL8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC47A1Q96FL8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC47A1Q96FL8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC47A1Q96FL8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC47A1Q96FL8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC47A1Q96FL8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC47A1Q96FL8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC47A1Q96FL8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC47A1Q96FL8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC47A1Q96FL8 AC079089.2-201ENST00000531211 1277 ntBASIC20.02■□□□□ 0.8
SLC47A1Q96FL8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC47A1Q96FL8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC47A1Q96FL8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC47A1Q96FL8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC47A1Q96FL8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SLC47A1Q96FL8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC47A1Q96FL8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.02■□□□□ 0.79
SLC47A1Q96FL8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.02■□□□□ 0.79
SLC47A1Q96FL8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC47A1Q96FL8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC47A1Q96FL8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
SLC47A1Q96FL8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC47A1Q96FL8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC47A1Q96FL8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.01■□□□□ 0.79
SLC47A1Q96FL8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC47A1Q96FL8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.01■□□□□ 0.79
SLC47A1Q96FL8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC47A1Q96FL8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC47A1Q96FL8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC47A1Q96FL8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SLC47A1Q96FL8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20■□□□□ 0.79
SLC47A1Q96FL8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SLC47A1Q96FL8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC47A1Q96FL8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC47A1Q96FL8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SLC47A1Q96FL8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC47A1Q96FL8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
SLC47A1Q96FL8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SLC47A1Q96FL8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC47A1Q96FL8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SLC47A1Q96FL8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC47A1Q96FL8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20■□□□□ 0.79
SLC47A1Q96FL8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20■□□□□ 0.79
SLC47A1Q96FL8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC47A1Q96FL8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC47A1Q96FL8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms