Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CKAP2Q8WWK9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
CKAP2Q8WWK9 BHLHE23-202ENST00000612929 1109 ntBASIC21.19■□□□□ 0.98
CKAP2Q8WWK9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CKAP2Q8WWK9 AC074183.2-201ENST00000623112 922 ntBASIC21.19■□□□□ 0.98
CKAP2Q8WWK9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CKAP2Q8WWK9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.19■□□□□ 0.98
CKAP2Q8WWK9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CKAP2Q8WWK9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CKAP2Q8WWK9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CKAP2Q8WWK9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CKAP2Q8WWK9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.18■□□□□ 0.98
CKAP2Q8WWK9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CKAP2Q8WWK9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.18■□□□□ 0.98
CKAP2Q8WWK9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CKAP2Q8WWK9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CKAP2Q8WWK9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CKAP2Q8WWK9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CKAP2Q8WWK9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.18■□□□□ 0.98
CKAP2Q8WWK9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CKAP2Q8WWK9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CKAP2Q8WWK9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CKAP2Q8WWK9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.17■□□□□ 0.98
CKAP2Q8WWK9 NTF6A-201ENST00000591175 560 ntBASIC21.17■□□□□ 0.98
CKAP2Q8WWK9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CKAP2Q8WWK9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CKAP2Q8WWK9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CKAP2Q8WWK9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CKAP2Q8WWK9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CKAP2Q8WWK9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CKAP2Q8WWK9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 AC073314.1-201ENST00000568729 2216 ntBASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CKAP2Q8WWK9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 AC009102.2-201ENST00000606772 1639 ntBASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 OR7E47P-201ENST00000546390 1422 ntBASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 AL031602.1-201ENST00000633169 911 ntBASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CKAP2Q8WWK9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CKAP2Q8WWK9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CKAP2Q8WWK9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.14■□□□□ 0.98
CKAP2Q8WWK9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CKAP2Q8WWK9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CKAP2Q8WWK9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
CKAP2Q8WWK9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CKAP2Q8WWK9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CKAP2Q8WWK9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CKAP2Q8WWK9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CKAP2Q8WWK9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.14■□□□□ 0.97
CKAP2Q8WWK9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CKAP2Q8WWK9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CKAP2Q8WWK9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CKAP2Q8WWK9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.14■□□□□ 0.97
CKAP2Q8WWK9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CKAP2Q8WWK9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.14■□□□□ 0.97
CKAP2Q8WWK9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.14■□□□□ 0.97
CKAP2Q8WWK9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CKAP2Q8WWK9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms