Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTCD2Q8WV60 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.59■■□□□ 1.05
PTCD2Q8WV60 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTCD2Q8WV60 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PTCD2Q8WV60 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.59■■□□□ 1.05
PTCD2Q8WV60 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PTCD2Q8WV60 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PTCD2Q8WV60 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.59■■□□□ 1.05
PTCD2Q8WV60 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PTCD2Q8WV60 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PTCD2Q8WV60 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.59■■□□□ 1.05
PTCD2Q8WV60 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.59■■□□□ 1.05
PTCD2Q8WV60 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.59■■□□□ 1.05
PTCD2Q8WV60 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.59■■□□□ 1.05
PTCD2Q8WV60 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTCD2Q8WV60 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
PTCD2Q8WV60 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.59■■□□□ 1.05
PTCD2Q8WV60 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PTCD2Q8WV60 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PTCD2Q8WV60 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
PTCD2Q8WV60 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.58■■□□□ 1.05
PTCD2Q8WV60 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.58■■□□□ 1.05
PTCD2Q8WV60 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.05
PTCD2Q8WV60 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PTCD2Q8WV60 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.58■■□□□ 1.05
PTCD2Q8WV60 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.58■■□□□ 1.05
PTCD2Q8WV60 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PTCD2Q8WV60 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.58■■□□□ 1.05
PTCD2Q8WV60 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PTCD2Q8WV60 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
PTCD2Q8WV60 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.58■■□□□ 1.04
PTCD2Q8WV60 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PTCD2Q8WV60 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PTCD2Q8WV60 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTCD2Q8WV60 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
PTCD2Q8WV60 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTCD2Q8WV60 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.57■■□□□ 1.04
PTCD2Q8WV60 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
PTCD2Q8WV60 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTCD2Q8WV60 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTCD2Q8WV60 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.57■■□□□ 1.04
PTCD2Q8WV60 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.57■■□□□ 1.04
PTCD2Q8WV60 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.57■■□□□ 1.04
PTCD2Q8WV60 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.57■■□□□ 1.04
PTCD2Q8WV60 AC104564.3-201ENST00000582367 638 ntBASIC21.57■■□□□ 1.04
PTCD2Q8WV60 MIR5787-201ENST00000611784 55 ntBASIC21.57■■□□□ 1.04
PTCD2Q8WV60 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTCD2Q8WV60 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTCD2Q8WV60 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTCD2Q8WV60 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
PTCD2Q8WV60 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTCD2Q8WV60 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.56■■□□□ 1.04
PTCD2Q8WV60 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTCD2Q8WV60 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PTCD2Q8WV60 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTCD2Q8WV60 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.56■■□□□ 1.04
PTCD2Q8WV60 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.56■■□□□ 1.04
PTCD2Q8WV60 AL358852.1-201ENST00000623174 1268 ntBASIC21.56■■□□□ 1.04
PTCD2Q8WV60 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTCD2Q8WV60 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTCD2Q8WV60 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTCD2Q8WV60 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTCD2Q8WV60 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.56■■□□□ 1.04
PTCD2Q8WV60 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTCD2Q8WV60 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 YBX1P1-201ENST00000445822 960 ntBASIC21.55■■□□□ 1.04
PTCD2Q8WV60 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 AC105233.4-201ENST00000642045 216 ntBASIC21.55■■□□□ 1.04
PTCD2Q8WV60 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD2Q8WV60 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTCD2Q8WV60 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.54■■□□□ 1.04
PTCD2Q8WV60 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.54■■□□□ 1.04
PTCD2Q8WV60 AC007375.3-201ENST00000600936 2314 ntBASIC21.54■■□□□ 1.04
PTCD2Q8WV60 AC027612.3-201ENST00000413684 1047 ntBASIC21.54■■□□□ 1.04
PTCD2Q8WV60 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PTCD2Q8WV60 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTCD2Q8WV60 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PTCD2Q8WV60 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms