Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.44■■□□□ 1.82
RTL9Q8NET4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC26.43■■□□□ 1.82
RTL9Q8NET4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.43■■□□□ 1.82
RTL9Q8NET4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RTL9Q8NET4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC26.43■■□□□ 1.82
RTL9Q8NET4 APTR-203ENST00000430801 583 ntTSL 5 BASIC26.43■■□□□ 1.82
RTL9Q8NET4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC26.43■■□□□ 1.82
RTL9Q8NET4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC26.43■■□□□ 1.82
RTL9Q8NET4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC26.43■■□□□ 1.82
RTL9Q8NET4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.42■■□□□ 1.82
RTL9Q8NET4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RTL9Q8NET4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RTL9Q8NET4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC26.42■■□□□ 1.82
RTL9Q8NET4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RTL9Q8NET4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
RTL9Q8NET4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC26.42■■□□□ 1.82
RTL9Q8NET4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
RTL9Q8NET4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
RTL9Q8NET4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.42■■□□□ 1.82
RTL9Q8NET4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RTL9Q8NET4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC26.42■■□□□ 1.82
RTL9Q8NET4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RTL9Q8NET4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RTL9Q8NET4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC26.41■■□□□ 1.82
RTL9Q8NET4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RTL9Q8NET4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RTL9Q8NET4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC26.41■■□□□ 1.82
RTL9Q8NET4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.41■■□□□ 1.82
RTL9Q8NET4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RTL9Q8NET4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC26.41■■□□□ 1.82
RTL9Q8NET4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC26.41■■□□□ 1.82
RTL9Q8NET4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC26.41■■□□□ 1.82
RTL9Q8NET4 TSPY20P-201ENST00000450910 630 ntBASIC26.41■■□□□ 1.82
RTL9Q8NET4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.41■■□□□ 1.82
RTL9Q8NET4 AC007322.4-201ENST00000509611 723 ntBASIC26.41■■□□□ 1.82
RTL9Q8NET4 AC083906.2-201ENST00000511578 360 ntBASIC26.41■■□□□ 1.82
RTL9Q8NET4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC26.41■■□□□ 1.82
RTL9Q8NET4 AC013268.1-206ENST00000638368 961 ntBASIC26.41■■□□□ 1.82
RTL9Q8NET4 AC112229.1-201ENST00000639295 961 ntBASIC26.41■■□□□ 1.82
RTL9Q8NET4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RTL9Q8NET4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RTL9Q8NET4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTL9Q8NET4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTL9Q8NET4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTL9Q8NET4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.4■■□□□ 1.82
RTL9Q8NET4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTL9Q8NET4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RTL9Q8NET4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.39■■□□□ 1.82
RTL9Q8NET4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
RTL9Q8NET4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
RTL9Q8NET4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RTL9Q8NET4 AL138781.1-201ENST00000566567 1274 ntBASIC26.39■■□□□ 1.82
RTL9Q8NET4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
RTL9Q8NET4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.39■■□□□ 1.82
RTL9Q8NET4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RTL9Q8NET4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
RTL9Q8NET4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RTL9Q8NET4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC26.38■■□□□ 1.81
RTL9Q8NET4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC26.38■■□□□ 1.81
RTL9Q8NET4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC26.38■■□□□ 1.81
RTL9Q8NET4 AC133552.2-202ENST00000575694 574 ntBASIC26.38■■□□□ 1.81
RTL9Q8NET4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC26.38■■□□□ 1.81
RTL9Q8NET4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RTL9Q8NET4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RTL9Q8NET4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
RTL9Q8NET4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.38■■□□□ 1.81
RTL9Q8NET4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
RTL9Q8NET4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC26.37■■□□□ 1.81
RTL9Q8NET4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
RTL9Q8NET4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC26.37■■□□□ 1.81
RTL9Q8NET4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RTL9Q8NET4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC26.37■■□□□ 1.81
RTL9Q8NET4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RTL9Q8NET4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC26.37■■□□□ 1.81
RTL9Q8NET4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.37■■□□□ 1.81
RTL9Q8NET4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
RTL9Q8NET4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTL9Q8NET4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RTL9Q8NET4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTL9Q8NET4 TERF1P5-201ENST00000477545 1207 ntBASIC26.36■■□□□ 1.81
RTL9Q8NET4 KRT18P6-201ENST00000555540 1265 ntBASIC26.36■■□□□ 1.81
RTL9Q8NET4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
RTL9Q8NET4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTL9Q8NET4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTL9Q8NET4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.36■■□□□ 1.81
RTL9Q8NET4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTL9Q8NET4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
RTL9Q8NET4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RTL9Q8NET4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.36■■□□□ 1.81
RTL9Q8NET4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTL9Q8NET4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTL9Q8NET4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTL9Q8NET4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
RTL9Q8NET4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
RTL9Q8NET4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
RTL9Q8NET4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RTL9Q8NET4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.35■■□□□ 1.81
RTL9Q8NET4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
RTL9Q8NET4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
RTL9Q8NET4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms