Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EFCAB3Q8N7B9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.01■□□□□ 0.95
EFCAB3Q8N7B9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EFCAB3Q8N7B9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EFCAB3Q8N7B9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
EFCAB3Q8N7B9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EFCAB3Q8N7B9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EFCAB3Q8N7B9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EFCAB3Q8N7B9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EFCAB3Q8N7B9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EFCAB3Q8N7B9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EFCAB3Q8N7B9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
EFCAB3Q8N7B9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EFCAB3Q8N7B9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21■□□□□ 0.95
EFCAB3Q8N7B9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21■□□□□ 0.95
EFCAB3Q8N7B9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
EFCAB3Q8N7B9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EFCAB3Q8N7B9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21■□□□□ 0.95
EFCAB3Q8N7B9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
EFCAB3Q8N7B9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
EFCAB3Q8N7B9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EFCAB3Q8N7B9 AC027682.1-201ENST00000562846 899 ntBASIC21■□□□□ 0.95
EFCAB3Q8N7B9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21■□□□□ 0.95
EFCAB3Q8N7B9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
EFCAB3Q8N7B9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21■□□□□ 0.95
EFCAB3Q8N7B9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
EFCAB3Q8N7B9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21■□□□□ 0.95
EFCAB3Q8N7B9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21■□□□□ 0.95
EFCAB3Q8N7B9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21■□□□□ 0.95
EFCAB3Q8N7B9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EFCAB3Q8N7B9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
EFCAB3Q8N7B9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.99■□□□□ 0.95
EFCAB3Q8N7B9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.99■□□□□ 0.95
EFCAB3Q8N7B9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
EFCAB3Q8N7B9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EFCAB3Q8N7B9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
EFCAB3Q8N7B9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
EFCAB3Q8N7B9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EFCAB3Q8N7B9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
EFCAB3Q8N7B9 AF106564.1-201ENST00000607058 2553 ntBASIC20.99■□□□□ 0.95
EFCAB3Q8N7B9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
EFCAB3Q8N7B9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EFCAB3Q8N7B9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.99■□□□□ 0.95
EFCAB3Q8N7B9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
EFCAB3Q8N7B9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.98■□□□□ 0.95
EFCAB3Q8N7B9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.98■□□□□ 0.95
EFCAB3Q8N7B9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EFCAB3Q8N7B9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EFCAB3Q8N7B9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
EFCAB3Q8N7B9 IRS3P-201ENST00000223076 1006 ntBASIC20.98■□□□□ 0.95
EFCAB3Q8N7B9 pRNA.6-201ENST00000610482 90 ntBASIC20.98■□□□□ 0.95
EFCAB3Q8N7B9 pRNA.5-201ENST00000612139 90 ntBASIC20.98■□□□□ 0.95
EFCAB3Q8N7B9 pRNA.11-201ENST00000618423 90 ntBASIC20.98■□□□□ 0.95
EFCAB3Q8N7B9 pRNA.13-201ENST00000619112 90 ntBASIC20.98■□□□□ 0.95
EFCAB3Q8N7B9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.98■□□□□ 0.95
EFCAB3Q8N7B9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
EFCAB3Q8N7B9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EFCAB3Q8N7B9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EFCAB3Q8N7B9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EFCAB3Q8N7B9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EFCAB3Q8N7B9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 AC017007.3-201ENST00000479865 435 ntBASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFCAB3Q8N7B9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EFCAB3Q8N7B9 AC004687.1-201ENST00000579003 1625 ntBASIC20.96■□□□□ 0.95
EFCAB3Q8N7B9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCAB3Q8N7B9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCAB3Q8N7B9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EFCAB3Q8N7B9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.96■□□□□ 0.95
EFCAB3Q8N7B9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.96■□□□□ 0.95
EFCAB3Q8N7B9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCAB3Q8N7B9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCAB3Q8N7B9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.96■□□□□ 0.95
EFCAB3Q8N7B9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EFCAB3Q8N7B9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.96■□□□□ 0.95
EFCAB3Q8N7B9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.96■□□□□ 0.95
EFCAB3Q8N7B9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCAB3Q8N7B9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EFCAB3Q8N7B9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCAB3Q8N7B9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
EFCAB3Q8N7B9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms