Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRAM1L1Q8N609 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRAM1L1Q8N609 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAM1L1Q8N609 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.15■□□□□ 0.98
TRAM1L1Q8N609 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRAM1L1Q8N609 KRT18P5-201ENST00000436075 1291 ntBASIC21.15■□□□□ 0.98
TRAM1L1Q8N609 NTF6G-201ENST00000591094 616 ntBASIC21.15■□□□□ 0.98
TRAM1L1Q8N609 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.15■□□□□ 0.98
TRAM1L1Q8N609 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.15■□□□□ 0.98
TRAM1L1Q8N609 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAM1L1Q8N609 AC026471.6-201ENST00000622954 1905 ntBASIC21.15■□□□□ 0.98
TRAM1L1Q8N609 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.15■□□□□ 0.98
TRAM1L1Q8N609 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TRAM1L1Q8N609 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRAM1L1Q8N609 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
TRAM1L1Q8N609 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
TRAM1L1Q8N609 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRAM1L1Q8N609 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAM1L1Q8N609 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
TRAM1L1Q8N609 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.14■□□□□ 0.97
TRAM1L1Q8N609 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.14■□□□□ 0.97
TRAM1L1Q8N609 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.14■□□□□ 0.97
TRAM1L1Q8N609 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.14■□□□□ 0.97
TRAM1L1Q8N609 AC003102.1-202ENST00000563394 1796 ntBASIC21.14■□□□□ 0.97
TRAM1L1Q8N609 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAM1L1Q8N609 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAM1L1Q8N609 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRAM1L1Q8N609 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TRAM1L1Q8N609 AP004607.4-201ENST00000530158 1459 ntBASIC21.13■□□□□ 0.97
TRAM1L1Q8N609 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRAM1L1Q8N609 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.13■□□□□ 0.97
TRAM1L1Q8N609 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
TRAM1L1Q8N609 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
TRAM1L1Q8N609 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAM1L1Q8N609 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAM1L1Q8N609 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
TRAM1L1Q8N609 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.13■□□□□ 0.97
TRAM1L1Q8N609 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TRAM1L1Q8N609 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAM1L1Q8N609 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAM1L1Q8N609 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.13■□□□□ 0.97
TRAM1L1Q8N609 EP400NL-214ENST00000641289 2402 ntBASIC21.13■□□□□ 0.97
TRAM1L1Q8N609 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAM1L1Q8N609 AC004854.2-201ENST00000608450 1441 ntBASIC21.12■□□□□ 0.97
TRAM1L1Q8N609 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAM1L1Q8N609 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.12■□□□□ 0.97
TRAM1L1Q8N609 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAM1L1Q8N609 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAM1L1Q8N609 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.12■□□□□ 0.97
TRAM1L1Q8N609 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAM1L1Q8N609 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAM1L1Q8N609 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.12■□□□□ 0.97
TRAM1L1Q8N609 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.12■□□□□ 0.97
TRAM1L1Q8N609 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.12■□□□□ 0.97
TRAM1L1Q8N609 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.12■□□□□ 0.97
TRAM1L1Q8N609 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAM1L1Q8N609 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAM1L1Q8N609 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAM1L1Q8N609 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAM1L1Q8N609 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAM1L1Q8N609 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.12■□□□□ 0.97
TRAM1L1Q8N609 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAM1L1Q8N609 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAM1L1Q8N609 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAM1L1Q8N609 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAM1L1Q8N609 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAM1L1Q8N609 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAM1L1Q8N609 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.11■□□□□ 0.97
TRAM1L1Q8N609 EEF1DP3-203ENST00000566025 782 ntBASIC21.11■□□□□ 0.97
TRAM1L1Q8N609 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.11■□□□□ 0.97
TRAM1L1Q8N609 KRT18P61-201ENST00000585825 1298 ntBASIC21.11■□□□□ 0.97
TRAM1L1Q8N609 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAM1L1Q8N609 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAM1L1Q8N609 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAM1L1Q8N609 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TRAM1L1Q8N609 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRAM1L1Q8N609 AC010542.4-201ENST00000563151 1910 ntBASIC21.1■□□□□ 0.97
TRAM1L1Q8N609 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TRAM1L1Q8N609 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRAM1L1Q8N609 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
TRAM1L1Q8N609 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAM1L1Q8N609 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TRAM1L1Q8N609 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAM1L1Q8N609 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAM1L1Q8N609 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAM1L1Q8N609 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRAM1L1Q8N609 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAM1L1Q8N609 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAM1L1Q8N609 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
TRAM1L1Q8N609 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.09■□□□□ 0.97
TRAM1L1Q8N609 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.09■□□□□ 0.97
TRAM1L1Q8N609 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.09■□□□□ 0.97
TRAM1L1Q8N609 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.09■□□□□ 0.97
TRAM1L1Q8N609 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.09■□□□□ 0.97
TRAM1L1Q8N609 AC053503.5-201ENST00000601508 636 ntBASIC21.09■□□□□ 0.97
TRAM1L1Q8N609 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAM1L1Q8N609 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.09■□□□□ 0.97
TRAM1L1Q8N609 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
TRAM1L1Q8N609 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms