Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BEST3Q8N1M1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BEST3Q8N1M1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BEST3Q8N1M1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BEST3Q8N1M1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BEST3Q8N1M1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BEST3Q8N1M1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.76■□□□□ 0.75
BEST3Q8N1M1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BEST3Q8N1M1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BEST3Q8N1M1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.76■□□□□ 0.75
BEST3Q8N1M1 AL034346.1-201ENST00000568244 1277 ntBASIC19.76■□□□□ 0.75
BEST3Q8N1M1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.76■□□□□ 0.75
BEST3Q8N1M1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.76■□□□□ 0.75
BEST3Q8N1M1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.76■□□□□ 0.75
BEST3Q8N1M1 AC073111.5-205ENST00000641717 521 ntBASIC19.76■□□□□ 0.75
BEST3Q8N1M1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BEST3Q8N1M1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BEST3Q8N1M1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BEST3Q8N1M1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BEST3Q8N1M1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BEST3Q8N1M1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
BEST3Q8N1M1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BEST3Q8N1M1 AC137767.1-201ENST00000602918 1920 ntBASIC19.75■□□□□ 0.75
BEST3Q8N1M1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
BEST3Q8N1M1 KRT18P11-201ENST00000435214 1283 ntBASIC19.75■□□□□ 0.75
BEST3Q8N1M1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BEST3Q8N1M1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BEST3Q8N1M1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BEST3Q8N1M1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
BEST3Q8N1M1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BEST3Q8N1M1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
BEST3Q8N1M1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BEST3Q8N1M1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST3Q8N1M1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST3Q8N1M1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST3Q8N1M1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST3Q8N1M1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
BEST3Q8N1M1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BEST3Q8N1M1 CDCA4P2-201ENST00000441182 718 ntBASIC19.74■□□□□ 0.75
BEST3Q8N1M1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.74■□□□□ 0.75
BEST3Q8N1M1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.74■□□□□ 0.75
BEST3Q8N1M1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.74■□□□□ 0.75
BEST3Q8N1M1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BEST3Q8N1M1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
BEST3Q8N1M1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BEST3Q8N1M1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
BEST3Q8N1M1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST3Q8N1M1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
BEST3Q8N1M1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST3Q8N1M1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST3Q8N1M1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST3Q8N1M1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST3Q8N1M1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST3Q8N1M1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BEST3Q8N1M1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
BEST3Q8N1M1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
BEST3Q8N1M1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.73■□□□□ 0.75
BEST3Q8N1M1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.73■□□□□ 0.75
BEST3Q8N1M1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.73■□□□□ 0.75
BEST3Q8N1M1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST3Q8N1M1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
BEST3Q8N1M1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
BEST3Q8N1M1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST3Q8N1M1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
BEST3Q8N1M1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST3Q8N1M1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST3Q8N1M1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST3Q8N1M1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST3Q8N1M1 ID1-201ENST00000376105 1233 ntBASIC19.72■□□□□ 0.75
BEST3Q8N1M1 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.72■□□□□ 0.75
BEST3Q8N1M1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.72■□□□□ 0.75
BEST3Q8N1M1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.72■□□□□ 0.75
BEST3Q8N1M1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
BEST3Q8N1M1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.72■□□□□ 0.75
BEST3Q8N1M1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
BEST3Q8N1M1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST3Q8N1M1 RAP2CP1-201ENST00000605103 478 ntBASIC19.72■□□□□ 0.75
BEST3Q8N1M1 AC011767.1-201ENST00000617410 1153 ntBASIC19.72■□□□□ 0.75
BEST3Q8N1M1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.72■□□□□ 0.75
BEST3Q8N1M1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.72■□□□□ 0.75
BEST3Q8N1M1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST3Q8N1M1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BEST3Q8N1M1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BEST3Q8N1M1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.71■□□□□ 0.75
BEST3Q8N1M1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.71■□□□□ 0.75
BEST3Q8N1M1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.71■□□□□ 0.75
BEST3Q8N1M1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.71■□□□□ 0.75
BEST3Q8N1M1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.71■□□□□ 0.75
BEST3Q8N1M1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.71■□□□□ 0.75
BEST3Q8N1M1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.71■□□□□ 0.75
BEST3Q8N1M1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BEST3Q8N1M1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BEST3Q8N1M1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.71■□□□□ 0.75
BEST3Q8N1M1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BEST3Q8N1M1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
BEST3Q8N1M1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BEST3Q8N1M1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.7■□□□□ 0.74
BEST3Q8N1M1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
BEST3Q8N1M1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.7■□□□□ 0.74
BEST3Q8N1M1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms