Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
SIX5Q8N196 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
SIX5Q8N196 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.9■■□□□ 1.1
SIX5Q8N196 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
SIX5Q8N196 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.89■■□□□ 1.09
SIX5Q8N196 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SIX5Q8N196 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SIX5Q8N196 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.89■■□□□ 1.09
SIX5Q8N196 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.89■■□□□ 1.09
SIX5Q8N196 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.89■■□□□ 1.09
SIX5Q8N196 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.89■■□□□ 1.09
SIX5Q8N196 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SIX5Q8N196 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SIX5Q8N196 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SIX5Q8N196 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SIX5Q8N196 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SIX5Q8N196 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
SIX5Q8N196 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SIX5Q8N196 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
SIX5Q8N196 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SIX5Q8N196 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SIX5Q8N196 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SIX5Q8N196 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.88■■□□□ 1.09
SIX5Q8N196 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.88■■□□□ 1.09
SIX5Q8N196 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.88■■□□□ 1.09
SIX5Q8N196 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.88■■□□□ 1.09
SIX5Q8N196 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
SIX5Q8N196 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.88■■□□□ 1.09
SIX5Q8N196 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.88■■□□□ 1.09
SIX5Q8N196 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.88■■□□□ 1.09
SIX5Q8N196 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.87■■□□□ 1.09
SIX5Q8N196 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SIX5Q8N196 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SIX5Q8N196 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.87■■□□□ 1.09
SIX5Q8N196 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SIX5Q8N196 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.87■■□□□ 1.09
SIX5Q8N196 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.87■■□□□ 1.09
SIX5Q8N196 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SIX5Q8N196 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.87■■□□□ 1.09
SIX5Q8N196 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.87■■□□□ 1.09
SIX5Q8N196 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.87■■□□□ 1.09
SIX5Q8N196 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SIX5Q8N196 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
SIX5Q8N196 AP004607.7-201ENST00000527152 1677 ntBASIC21.87■■□□□ 1.09
SIX5Q8N196 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SIX5Q8N196 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.87■■□□□ 1.09
SIX5Q8N196 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.86■■□□□ 1.09
SIX5Q8N196 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SIX5Q8N196 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SIX5Q8N196 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.86■■□□□ 1.09
SIX5Q8N196 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.86■■□□□ 1.09
SIX5Q8N196 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.86■■□□□ 1.09
SIX5Q8N196 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.86■■□□□ 1.09
SIX5Q8N196 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
SIX5Q8N196 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SIX5Q8N196 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.86■■□□□ 1.09
SIX5Q8N196 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.86■■□□□ 1.09
SIX5Q8N196 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.86■■□□□ 1.09
SIX5Q8N196 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SIX5Q8N196 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SIX5Q8N196 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SIX5Q8N196 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SIX5Q8N196 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.85■■□□□ 1.09
SIX5Q8N196 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.85■■□□□ 1.09
SIX5Q8N196 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SIX5Q8N196 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SIX5Q8N196 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SIX5Q8N196 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SIX5Q8N196 AC091874.3-201ENST00000512672 1195 ntBASIC21.85■■□□□ 1.09
SIX5Q8N196 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SIX5Q8N196 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.85■■□□□ 1.09
SIX5Q8N196 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.85■■□□□ 1.09
SIX5Q8N196 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.85■■□□□ 1.09
SIX5Q8N196 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SIX5Q8N196 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SIX5Q8N196 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SIX5Q8N196 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SIX5Q8N196 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SIX5Q8N196 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SIX5Q8N196 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SIX5Q8N196 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SIX5Q8N196 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SIX5Q8N196 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SIX5Q8N196 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SIX5Q8N196 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.84■■□□□ 1.09
SIX5Q8N196 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SIX5Q8N196 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.84■■□□□ 1.09
SIX5Q8N196 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.84■■□□□ 1.09
SIX5Q8N196 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.84■■□□□ 1.09
SIX5Q8N196 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.84■■□□□ 1.09
SIX5Q8N196 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.83■■□□□ 1.09
SIX5Q8N196 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SIX5Q8N196 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.83■■□□□ 1.09
SIX5Q8N196 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SIX5Q8N196 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SIX5Q8N196 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.83■■□□□ 1.09
SIX5Q8N196 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SIX5Q8N196 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.83■■□□□ 1.09
SIX5Q8N196 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.83■■□□□ 1.09
SIX5Q8N196 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms