Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 FAM201B-201ENST00000458407 597 ntBASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 MIR4758-201ENST00000577688 71 ntBASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL27A1Q8IZC6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
COL27A1Q8IZC6 RBM17P2-201ENST00000616397 1405 ntBASIC20.34■□□□□ 0.85
COL27A1Q8IZC6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL27A1Q8IZC6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL27A1Q8IZC6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
COL27A1Q8IZC6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.34■□□□□ 0.85
COL27A1Q8IZC6 BX276092.2-201ENST00000417668 665 ntBASIC20.34■□□□□ 0.85
COL27A1Q8IZC6 DUSP5P2-201ENST00000426873 1033 ntBASIC20.34■□□□□ 0.85
COL27A1Q8IZC6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.34■□□□□ 0.85
COL27A1Q8IZC6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL27A1Q8IZC6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL27A1Q8IZC6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.34■□□□□ 0.85
COL27A1Q8IZC6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
COL27A1Q8IZC6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL27A1Q8IZC6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL27A1Q8IZC6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.33■□□□□ 0.85
COL27A1Q8IZC6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.33■□□□□ 0.85
COL27A1Q8IZC6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL27A1Q8IZC6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.33■□□□□ 0.85
COL27A1Q8IZC6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL27A1Q8IZC6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL27A1Q8IZC6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL27A1Q8IZC6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.33■□□□□ 0.85
COL27A1Q8IZC6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL27A1Q8IZC6 AC087742.1-201ENST00000575880 1738 ntBASIC20.33■□□□□ 0.85
COL27A1Q8IZC6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL27A1Q8IZC6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.33■□□□□ 0.84
COL27A1Q8IZC6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL27A1Q8IZC6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL27A1Q8IZC6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.33■□□□□ 0.84
COL27A1Q8IZC6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL27A1Q8IZC6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL27A1Q8IZC6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.32■□□□□ 0.84
COL27A1Q8IZC6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL27A1Q8IZC6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL27A1Q8IZC6 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.32■□□□□ 0.84
COL27A1Q8IZC6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
COL27A1Q8IZC6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL27A1Q8IZC6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL27A1Q8IZC6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.32■□□□□ 0.84
COL27A1Q8IZC6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL27A1Q8IZC6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL27A1Q8IZC6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
COL27A1Q8IZC6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.31■□□□□ 0.84
COL27A1Q8IZC6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
COL27A1Q8IZC6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL27A1Q8IZC6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
COL27A1Q8IZC6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.31■□□□□ 0.84
COL27A1Q8IZC6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.3■□□□□ 0.84
COL27A1Q8IZC6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.3■□□□□ 0.84
COL27A1Q8IZC6 AC091874.3-201ENST00000512672 1195 ntBASIC20.3■□□□□ 0.84
COL27A1Q8IZC6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.3■□□□□ 0.84
COL27A1Q8IZC6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
COL27A1Q8IZC6 KRT16P2-201ENST00000414673 1423 ntBASIC20.3■□□□□ 0.84
COL27A1Q8IZC6 AC010980.2-201ENST00000587099 1412 ntBASIC20.3■□□□□ 0.84
COL27A1Q8IZC6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
COL27A1Q8IZC6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL27A1Q8IZC6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL27A1Q8IZC6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL27A1Q8IZC6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.3■□□□□ 0.84
COL27A1Q8IZC6 AL162412.1-201ENST00000567129 965 ntBASIC20.3■□□□□ 0.84
COL27A1Q8IZC6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.3■□□□□ 0.84
COL27A1Q8IZC6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.3■□□□□ 0.84
COL27A1Q8IZC6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
COL27A1Q8IZC6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL27A1Q8IZC6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.3■□□□□ 0.84
COL27A1Q8IZC6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL27A1Q8IZC6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 AC069236.1-201ENST00000604339 616 ntBASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms