Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF440Q8IYI8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ZNF440Q8IYI8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF440Q8IYI8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF440Q8IYI8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF440Q8IYI8 AP006587.3-201ENST00000525742 1516 ntBASIC19.52■□□□□ 0.72
ZNF440Q8IYI8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF440Q8IYI8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ZNF440Q8IYI8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF440Q8IYI8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.52■□□□□ 0.72
ZNF440Q8IYI8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ZNF440Q8IYI8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF440Q8IYI8 MIR572-201ENST00000384983 95 ntBASIC19.52■□□□□ 0.72
ZNF440Q8IYI8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.52■□□□□ 0.72
ZNF440Q8IYI8 AL136967.2-201ENST00000623968 743 ntBASIC19.52■□□□□ 0.72
ZNF440Q8IYI8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.52■□□□□ 0.72
ZNF440Q8IYI8 CLDN5-201ENST00000403084 2357 ntBASIC19.52■□□□□ 0.72
ZNF440Q8IYI8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF440Q8IYI8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
ZNF440Q8IYI8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.51■□□□□ 0.71
ZNF440Q8IYI8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF440Q8IYI8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF440Q8IYI8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF440Q8IYI8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF440Q8IYI8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
ZNF440Q8IYI8 AC026471.6-201ENST00000622954 1905 ntBASIC19.51■□□□□ 0.71
ZNF440Q8IYI8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ZNF440Q8IYI8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.51■□□□□ 0.71
ZNF440Q8IYI8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF440Q8IYI8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.51■□□□□ 0.71
ZNF440Q8IYI8 AL031432.3-201ENST00000607698 485 ntBASIC19.51■□□□□ 0.71
ZNF440Q8IYI8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ZNF440Q8IYI8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF440Q8IYI8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF440Q8IYI8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF440Q8IYI8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF440Q8IYI8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
ZNF440Q8IYI8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF440Q8IYI8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.5■□□□□ 0.71
ZNF440Q8IYI8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF440Q8IYI8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF440Q8IYI8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF440Q8IYI8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF440Q8IYI8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ZNF440Q8IYI8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.49■□□□□ 0.71
ZNF440Q8IYI8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ZNF440Q8IYI8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.49■□□□□ 0.71
ZNF440Q8IYI8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF440Q8IYI8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ZNF440Q8IYI8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF440Q8IYI8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF440Q8IYI8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.49■□□□□ 0.71
ZNF440Q8IYI8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.49■□□□□ 0.71
ZNF440Q8IYI8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.49■□□□□ 0.71
ZNF440Q8IYI8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF440Q8IYI8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF440Q8IYI8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.49■□□□□ 0.71
ZNF440Q8IYI8 SUDS3P1-201ENST00000505831 966 ntBASIC19.49■□□□□ 0.71
ZNF440Q8IYI8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ZNF440Q8IYI8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.49■□□□□ 0.71
ZNF440Q8IYI8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF440Q8IYI8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF440Q8IYI8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF440Q8IYI8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF440Q8IYI8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF440Q8IYI8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF440Q8IYI8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.48■□□□□ 0.71
ZNF440Q8IYI8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.48■□□□□ 0.71
ZNF440Q8IYI8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ZNF440Q8IYI8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF440Q8IYI8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ZNF440Q8IYI8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF440Q8IYI8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF440Q8IYI8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF440Q8IYI8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.48■□□□□ 0.71
ZNF440Q8IYI8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF440Q8IYI8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF440Q8IYI8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ZNF440Q8IYI8 AC003102.1-202ENST00000563394 1796 ntBASIC19.47■□□□□ 0.71
ZNF440Q8IYI8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ZNF440Q8IYI8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF440Q8IYI8 AC142381.2-201ENST00000566120 298 ntBASIC19.47■□□□□ 0.71
ZNF440Q8IYI8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF440Q8IYI8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ZNF440Q8IYI8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF440Q8IYI8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF440Q8IYI8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF440Q8IYI8 BX005040.4-201ENST00000637145 1518 ntBASIC19.46■□□□□ 0.71
ZNF440Q8IYI8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF440Q8IYI8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ZNF440Q8IYI8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ZNF440Q8IYI8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF440Q8IYI8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.46■□□□□ 0.71
ZNF440Q8IYI8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF440Q8IYI8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF440Q8IYI8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF440Q8IYI8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF440Q8IYI8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF440Q8IYI8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF440Q8IYI8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms