Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 AC133552.2-202ENST00000575694 574 ntBASIC26.59■■□□□ 1.85
DDX60Q8IY21 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
DDX60Q8IY21 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
DDX60Q8IY21 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
DDX60Q8IY21 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC26.59■■□□□ 1.85
DDX60Q8IY21 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC26.59■■□□□ 1.85
DDX60Q8IY21 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
DDX60Q8IY21 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC26.59■■□□□ 1.85
DDX60Q8IY21 PLLP-204ENST00000569059 665 ntTSL 3 BASIC26.59■■□□□ 1.85
DDX60Q8IY21 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC26.59■■□□□ 1.85
DDX60Q8IY21 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC26.59■■□□□ 1.85
DDX60Q8IY21 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC26.59■■□□□ 1.85
DDX60Q8IY21 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC26.58■■□□□ 1.85
DDX60Q8IY21 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX60Q8IY21 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX60Q8IY21 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX60Q8IY21 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.58■■□□□ 1.85
DDX60Q8IY21 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX60Q8IY21 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC26.58■■□□□ 1.85
DDX60Q8IY21 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX60Q8IY21 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
DDX60Q8IY21 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX60Q8IY21 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX60Q8IY21 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC26.57■■□□□ 1.84
DDX60Q8IY21 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC26.57■■□□□ 1.84
DDX60Q8IY21 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26.57■■□□□ 1.84
DDX60Q8IY21 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC26.57■■□□□ 1.84
DDX60Q8IY21 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
DDX60Q8IY21 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
DDX60Q8IY21 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC26.57■■□□□ 1.84
DDX60Q8IY21 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
DDX60Q8IY21 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC26.56■■□□□ 1.84
DDX60Q8IY21 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
DDX60Q8IY21 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC26.56■■□□□ 1.84
DDX60Q8IY21 PHB2-213ENST00000546111 858 ntTSL 2 BASIC26.56■■□□□ 1.84
DDX60Q8IY21 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC26.56■■□□□ 1.84
DDX60Q8IY21 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
DDX60Q8IY21 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC26.56■■□□□ 1.84
DDX60Q8IY21 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
DDX60Q8IY21 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
DDX60Q8IY21 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
DDX60Q8IY21 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC26.56■■□□□ 1.84
DDX60Q8IY21 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
DDX60Q8IY21 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC26.56■■□□□ 1.84
DDX60Q8IY21 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC26.56■■□□□ 1.84
DDX60Q8IY21 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
DDX60Q8IY21 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
DDX60Q8IY21 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
DDX60Q8IY21 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
DDX60Q8IY21 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
DDX60Q8IY21 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
DDX60Q8IY21 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC26.55■■□□□ 1.84
DDX60Q8IY21 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
DDX60Q8IY21 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
DDX60Q8IY21 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC26.54■■□□□ 1.84
DDX60Q8IY21 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX60Q8IY21 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
DDX60Q8IY21 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX60Q8IY21 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
DDX60Q8IY21 KLF13-207ENST00000560473 489 ntTSL 3 BASIC26.54■■□□□ 1.84
DDX60Q8IY21 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX60Q8IY21 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC26.54■■□□□ 1.84
DDX60Q8IY21 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX60Q8IY21 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX60Q8IY21 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.54■■□□□ 1.84
DDX60Q8IY21 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX60Q8IY21 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX60Q8IY21 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
DDX60Q8IY21 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX60Q8IY21 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
DDX60Q8IY21 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX60Q8IY21 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX60Q8IY21 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
DDX60Q8IY21 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
DDX60Q8IY21 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX60Q8IY21 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX60Q8IY21 BMP1-204ENST00000397814 836 ntTSL 4 BASIC26.53■■□□□ 1.84
DDX60Q8IY21 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX60Q8IY21 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.53■■□□□ 1.84
DDX60Q8IY21 SLC7A5P1-201ENST00000568957 537 ntBASIC26.53■■□□□ 1.84
DDX60Q8IY21 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
DDX60Q8IY21 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC26.53■■□□□ 1.84
DDX60Q8IY21 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC26.53■■□□□ 1.84
DDX60Q8IY21 FGF8-207ENST00000618991 856 ntTSL 3 BASIC26.53■■□□□ 1.84
DDX60Q8IY21 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX60Q8IY21 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX60Q8IY21 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
DDX60Q8IY21 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.52■■□□□ 1.84
DDX60Q8IY21 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC26.52■■□□□ 1.84
DDX60Q8IY21 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
DDX60Q8IY21 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
DDX60Q8IY21 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
DDX60Q8IY21 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
DDX60Q8IY21 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX60Q8IY21 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX60Q8IY21 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC26.51■■□□□ 1.83
DDX60Q8IY21 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC26.51■■□□□ 1.83
DDX60Q8IY21 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
DDX60Q8IY21 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC26.51■■□□□ 1.83
DDX60Q8IY21 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms