Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 Z92544.1-202ENST00000571933 1220 ntBASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 LINC01006-201ENST00000333319 2292 ntBASIC18.49■□□□□ 0.55
LRRTM1Q86UE6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRTM1Q86UE6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRTM1Q86UE6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.49■□□□□ 0.55
LRRTM1Q86UE6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRTM1Q86UE6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRTM1Q86UE6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.49■□□□□ 0.55
LRRTM1Q86UE6 MIR4787-201ENST00000607364 84 ntBASIC18.49■□□□□ 0.55
LRRTM1Q86UE6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRTM1Q86UE6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LRRTM1Q86UE6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.49■□□□□ 0.55
LRRTM1Q86UE6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRTM1Q86UE6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LRRTM1Q86UE6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 AL049796.1-201ENST00000565336 1766 ntBASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 AC241377.3-202ENST00000626088 1088 ntBASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 AC241585.3-202ENST00000628937 1088 ntBASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 AC245100.8-202ENST00000629247 1058 ntBASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 FEM1AP1-201ENST00000431297 1995 ntBASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRTM1Q86UE6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 RNF165-205ENST00000588679 2904 ntBASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 AL117332.1-201ENST00000622628 974 ntBASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
LRRTM1Q86UE6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM1Q86UE6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LRRTM1Q86UE6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM1Q86UE6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM1Q86UE6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM1Q86UE6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LRRTM1Q86UE6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM1Q86UE6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM1Q86UE6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM1Q86UE6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LRRTM1Q86UE6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM1Q86UE6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM1Q86UE6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRTM1Q86UE6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM1Q86UE6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM1Q86UE6 AC006455.2-201ENST00000429931 906 ntBASIC18.46■□□□□ 0.55
LRRTM1Q86UE6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LRRTM1Q86UE6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM1Q86UE6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM1Q86UE6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRTM1Q86UE6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRTM1Q86UE6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRTM1Q86UE6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRTM1Q86UE6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LRRTM1Q86UE6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LRRTM1Q86UE6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRTM1Q86UE6 pRNA.6-201ENST00000610482 90 ntBASIC18.45■□□□□ 0.54
LRRTM1Q86UE6 pRNA.5-201ENST00000612139 90 ntBASIC18.45■□□□□ 0.54
LRRTM1Q86UE6 pRNA.11-201ENST00000618423 90 ntBASIC18.45■□□□□ 0.54
LRRTM1Q86UE6 pRNA.13-201ENST00000619112 90 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms